BLASTX nr result

ID: Glycyrrhiza23_contig00029676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029676
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623975.1| Origin recognition complex 5 subunit [Medica...   132   3e-29
ref|XP_003533607.1| PREDICTED: origin recognition complex subuni...   121   5e-26
ref|XP_003551665.1| PREDICTED: origin recognition complex subuni...   119   3e-25
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   104   6e-21

>ref|XP_003623975.1| Origin recognition complex 5 subunit [Medicago truncatula]
           gi|355498990|gb|AES80193.1| Origin recognition complex 5
           subunit [Medicago truncatula]
          Length = 542

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/101 (71%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = +1

Query: 139 MDKEEAPQIXXXXXXXXXXXXXXXXXXXXKVNS-LEPLTINDLLVGGGPISLDDIISSFP 315
           MDKEE+PQI                    KVNS LE LTINDLLVGG P+SLDDIISSFP
Sbjct: 1   MDKEESPQIPRRTTRSLSTPSTSNIVPAAKVNSSLESLTINDLLVGGDPVSLDDIISSFP 60

Query: 316 GRNSQIREIVRLLGPLNSPILPLFVYGGASTGKSSIILQLF 438
           GR+SQI EIVRLLGPLNSP+LPLFVYGGASTGK+SIILQLF
Sbjct: 61  GRSSQIHEIVRLLGPLNSPLLPLFVYGGASTGKTSIILQLF 101


>ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 542

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/71 (85%), Positives = 66/71 (92%)
 Frame = +1

Query: 226 KVNSLEPLTINDLLVGGGPISLDDIISSFPGRNSQIREIVRLLGPLNSPILPLFVYGGAS 405
           KV SLEPLTINDLLVGG PISLDDIISSFPGR+SQI E+VR LGPLNSP+LPLFVYG +S
Sbjct: 32  KVTSLEPLTINDLLVGGDPISLDDIISSFPGRSSQILEVVRHLGPLNSPMLPLFVYGSSS 91

Query: 406 TGKSSIILQLF 438
           TGK+SIILQLF
Sbjct: 92  TGKTSIILQLF 102


>ref|XP_003551665.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 541

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = +1

Query: 226 KVNSLEPLTINDLLVGGGPISLDDIISSFPGRNSQIREIVRLLGPLNSPILPLFVYGGAS 405
           KV  LEPLTINDLLVGG PISL+DIISSFPGR+SQI E+VR LGPLNSPILPLFVYG +S
Sbjct: 32  KVTCLEPLTINDLLVGGDPISLNDIISSFPGRSSQILEVVRHLGPLNSPILPLFVYGSSS 91

Query: 406 TGKSSIILQLF 438
           TGK+SIILQLF
Sbjct: 92  TGKTSIILQLF 102


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +1

Query: 139 MDKEEAPQIXXXXXXXXXXXXXXXXXXXX-KVNSLEPLTINDLLVGGGPISLDDIISSFP 315
           M KEE+PQI                     K +   PLTINDL+ GG PI LD+++SSFP
Sbjct: 1   MGKEESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTINDLVFGGEPIKLDELLSSFP 60

Query: 316 GRNSQIREIVRLLGPLNSPILPLFVYGGASTGKSSIILQLF 438
           GR  QI E++RLLGPLNSP+LPLF+YGG STGK+SIILQ+F
Sbjct: 61  GRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIF 101


>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = +1

Query: 226 KVNSLEPLTINDLLVGGGPISLDDIISSFPGRNSQIREIVRLLGPLNSPILPLFVYGGAS 405
           K +   PLTINDL+ GG PI LD+++SSFPGR  QI E++RLLGPLNSP+LPLF+YGG S
Sbjct: 32  KTSEPHPLTINDLVFGGEPIKLDELLSSFPGRRIQILELMRLLGPLNSPMLPLFLYGGTS 91

Query: 406 TGKSSIILQLF 438
           TGK+SIILQ+F
Sbjct: 92  TGKTSIILQIF 102


Top