BLASTX nr result

ID: Glycyrrhiza23_contig00029649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029649
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   239   1e-61
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   201   7e-50
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   198   4e-49
emb|CBI30307.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   197   1e-48

>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  239 bits (611), Expect = 1e-61
 Identities = 123/150 (82%), Positives = 141/150 (94%)
 Frame = -3

Query: 452 EASDLSLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 273
           EASDL++TLY LLNTIVPSTLQLSAM+MQMLVISP LSLISA+++PCMVLVV FLGQELR
Sbjct: 154 EASDLAVTLYTLLNTIVPSTLQLSAMMMQMLVISPTLSLISAMIVPCMVLVVTFLGQELR 213

Query: 272 KISKQSHISIAALSAYLNEVLPAILFVKANNAELSECARFKRLALVDCSAKLKKKRMKAV 93
           KISK++H+SIAALSAYLNEVLPAILFVKANNA+  E  RFKRLAL+D +A+LKKK+MKA+
Sbjct: 214 KISKEAHVSIAALSAYLNEVLPAILFVKANNAQSCENTRFKRLALMDYNARLKKKKMKAL 273

Query: 92  IPQVIQAIYFGVISILCAGSVVISRGSFDR 3
           IPQVIQAIYFGV+SILCAGS++ISRGS DR
Sbjct: 274 IPQVIQAIYFGVLSILCAGSLMISRGSLDR 303


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  201 bits (510), Expect = 7e-50
 Identities = 103/149 (69%), Positives = 124/149 (83%)
 Frame = -3

Query: 452 EASDLSLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 273
           EA+D++ TLYALLNTIVPS LQLSAM  +MLVISP LSLISA+VIPC  L +A+LG  LR
Sbjct: 121 EAADVADTLYALLNTIVPSALQLSAMASRMLVISPALSLISAMVIPCTALAIAYLGTRLR 180

Query: 272 KISKQSHISIAALSAYLNEVLPAILFVKANNAELSECARFKRLALVDCSAKLKKKRMKAV 93
           KISK++ ++I+ALSAYLNEVLPAILFVKA+NAE  E ARF+RLA  D SA L K++MKA 
Sbjct: 181 KISKKAQLTISALSAYLNEVLPAILFVKASNAEFCEIARFERLAYADLSALLTKRKMKAF 240

Query: 92  IPQVIQAIYFGVISILCAGSVVISRGSFD 6
           IPQ++Q IYFG +SILC GS+V+S G FD
Sbjct: 241 IPQIVQIIYFGALSILCVGSMVVSSGCFD 269


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  198 bits (503), Expect = 4e-49
 Identities = 101/149 (67%), Positives = 121/149 (81%)
 Frame = -3

Query: 452 EASDLSLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 273
           +A+D+S TLYALLNT++PS LQLSAM  +ML ISPVLSLISA+VIPCM   +A LG+ LR
Sbjct: 199 QAADVSDTLYALLNTVLPSALQLSAMASRMLAISPVLSLISAMVIPCMAFAIACLGERLR 258

Query: 272 KISKQSHISIAALSAYLNEVLPAILFVKANNAELSECARFKRLALVDCSAKLKKKRMKAV 93
           KISK++H+SIA LSAYLNEVLPAILFVKANN EL E ARF+RLA  D +   KKK MK +
Sbjct: 259 KISKKAHLSIATLSAYLNEVLPAILFVKANNGELCESARFQRLAHADLTEHFKKKNMKVL 318

Query: 92  IPQVIQAIYFGVISILCAGSVVISRGSFD 6
           IPQ+IQ IYFG + +LC GS+V+S G FD
Sbjct: 319 IPQIIQIIYFGALFMLCCGSMVVSCGCFD 347


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  197 bits (500), Expect = 1e-48
 Identities = 102/149 (68%), Positives = 126/149 (84%)
 Frame = -3

Query: 452 EASDLSLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 273
           EASD++ T++ALLNTIVPS LQLSAM  QML ISP LSLISA+VIP M LV+A LG+ LR
Sbjct: 274 EASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLR 333

Query: 272 KISKQSHISIAALSAYLNEVLPAILFVKANNAELSECARFKRLALVDCSAKLKKKRMKAV 93
           KISK++H+SIAALSAYLNE+LP+ILFVKA+NAELSE ARF+RLA  D S +LKK++MKA+
Sbjct: 334 KISKRAHLSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKAL 393

Query: 92  IPQVIQAIYFGVISILCAGSVVISRGSFD 6
           IPQ++Q IYFG +SI   GS+V+  G+ D
Sbjct: 394 IPQIMQIIYFGALSIFFVGSLVVPSGALD 422


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  197 bits (500), Expect = 1e-48
 Identities = 102/149 (68%), Positives = 126/149 (84%)
 Frame = -3

Query: 452 EASDLSLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 273
           EASD++ T++ALLNTIVPS LQLSAM  QML ISP LSLISA+VIP M LV+A LG+ LR
Sbjct: 180 EASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLR 239

Query: 272 KISKQSHISIAALSAYLNEVLPAILFVKANNAELSECARFKRLALVDCSAKLKKKRMKAV 93
           KISK++H+SIAALSAYLNE+LP+ILFVKA+NAELSE ARF+RLA  D S +LKK++MKA+
Sbjct: 240 KISKRAHLSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKAL 299

Query: 92  IPQVIQAIYFGVISILCAGSVVISRGSFD 6
           IPQ++Q IYFG +SI   GS+V+  G+ D
Sbjct: 300 IPQIMQIIYFGALSIFFVGSLVVPSGALD 328


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