BLASTX nr result

ID: Glycyrrhiza23_contig00029645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029645
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...   332   9e-89
gb|ACU21197.1| unknown [Glycine max]                                  331   2e-88
gb|AFK34824.1| unknown [Medicago truncatula]                          300   5e-79
ref|XP_003606676.1| hypothetical protein MTR_4g064230 [Medicago ...   289   7e-76
ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...   191   2e-46

>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
           max]
          Length = 435

 Score =  332 bits (851), Expect = 9e-89
 Identities = 178/270 (65%), Positives = 200/270 (74%), Gaps = 1/270 (0%)
 Frame = -2

Query: 809 SFPIPRGGPIYVPNMPASSSIRAPHFXXXXXXXXXXLEAEXXXXXXXXXXXXXXXXLKVF 630
           S PIPRGGPIYVPNM   S+ R PHF          LEAE                 K+F
Sbjct: 14  SIPIPRGGPIYVPNMVGPST-RVPHFQTCLLSELRNLEAELSEDFSHLDISVDDL--KIF 70

Query: 629 TEDELMDMALKQVFEGRENNENYPPLLNQPNAGCH-EKNSKRKRSGTNNPILDSSCIEKV 453
           TED+LMDMALK+VF+GREN+EN+PPLL+QPNA    EK S RKR GTN+ +L+S CIEKV
Sbjct: 71  TEDDLMDMALKEVFQGRENDENHPPLLDQPNASRFGEKKSNRKRKGTNDSVLESDCIEKV 130

Query: 452 EKVVRIKQKQEEDKAAVRLHSFNPVCRINESAHKSVKTERMMSLRSTSATRKVNTVSLQE 273
           E+VVRIKQKQEEDKA+V+LHSF+   RINE+ HKS +TERM +LRSTS+TRKVNT SLQE
Sbjct: 131 EQVVRIKQKQEEDKASVKLHSFDR--RINEAVHKSTRTERMRTLRSTSSTRKVNTASLQE 188

Query: 272 HIPVQYPEVVLSVEIYHNVRKNVKXXXXXXXXXXXXXXLRDKIYCSMDQVMQKAGQHDPS 93
           H+PV YPEVVLSVE+YHNVRK  K              LRDKI+CS DQVM KAGQHDPS
Sbjct: 189 HLPVLYPEVVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVMHKAGQHDPS 248

Query: 92  GYFLIEDVFYTDLRDPSAIDLTRPILDWLR 3
           GYFLIEDVF  DLRDPSAIDLTRPILDWLR
Sbjct: 249 GYFLIEDVFCPDLRDPSAIDLTRPILDWLR 278


>gb|ACU21197.1| unknown [Glycine max]
          Length = 287

 Score =  331 bits (849), Expect = 2e-88
 Identities = 177/270 (65%), Positives = 200/270 (74%), Gaps = 1/270 (0%)
 Frame = -2

Query: 809 SFPIPRGGPIYVPNMPASSSIRAPHFXXXXXXXXXXLEAEXXXXXXXXXXXXXXXXLKVF 630
           S PIPRGGPIYVPNM   S+ R PHF          LEAE                 K+F
Sbjct: 14  SIPIPRGGPIYVPNMVGPST-RVPHFQTCLLSELRNLEAELSEDFSHLDISVDDL--KIF 70

Query: 629 TEDELMDMALKQVFEGRENNENYPPLLNQPNAGCH-EKNSKRKRSGTNNPILDSSCIEKV 453
           TED+LMDMALK+VF+GREN+EN+PPLL+QPNA    EK S RKR GTN+ +L+S CIEKV
Sbjct: 71  TEDDLMDMALKEVFQGRENDENHPPLLDQPNASRFGEKKSNRKRKGTNDSVLESDCIEKV 130

Query: 452 EKVVRIKQKQEEDKAAVRLHSFNPVCRINESAHKSVKTERMMSLRSTSATRKVNTVSLQE 273
           E+VVRIKQKQEEDKA+V+LHSF+   RINE+ HKS +TERM +LRSTS+TRKVNT SLQE
Sbjct: 131 EQVVRIKQKQEEDKASVKLHSFDR--RINEAVHKSTRTERMRTLRSTSSTRKVNTASLQE 188

Query: 272 HIPVQYPEVVLSVEIYHNVRKNVKXXXXXXXXXXXXXXLRDKIYCSMDQVMQKAGQHDPS 93
           H+PV YPEVVLSVE+YHNVRK  K              LRDKI+CS DQVM KAGQHDPS
Sbjct: 189 HLPVLYPEVVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVMHKAGQHDPS 248

Query: 92  GYFLIEDVFYTDLRDPSAIDLTRPILDWLR 3
           GYF+IEDVF  DLRDPSAIDLTRPILDWLR
Sbjct: 249 GYFIIEDVFCPDLRDPSAIDLTRPILDWLR 278


>gb|AFK34824.1| unknown [Medicago truncatula]
          Length = 447

 Score =  300 bits (767), Expect = 5e-79
 Identities = 170/278 (61%), Positives = 192/278 (69%), Gaps = 9/278 (3%)
 Frame = -2

Query: 809 SFPIPRGGPIYVPNMPASSSIRAPHFXXXXXXXXXXLEAEXXXXXXXXXXXXXXXXLKVF 630
           S  IPRGGPIYV NM +   +R P F          L++E                 KVF
Sbjct: 16  SISIPRGGPIYVSNM-SGPIVRVPLFQDSILTQLHSLQSELPPDSNHDISVDDL---KVF 71

Query: 629 TEDELMDMALKQVFEGRENNENYPPLLNQPNAGCH--EKNSKRKRSGTNNPILDSSCIEK 456
           TED+LMDMALKQVF+GR+NN++ P        GC   +K  +RK   TN PILDS+C EK
Sbjct: 72  TEDDLMDMALKQVFQGRDNNQDPPNAELNIEFGCRGQKKQFRRKSRLTNKPILDSNCKEK 131

Query: 455 VEKVVRIKQKQEEDKAAVRLHSFNPVCRINESAHKSVKTERMMSLRSTSATRKVNTVSLQ 276
           VE+VVRIKQKQEEDKA VRLHSF+P CRIN+SA+KS+KT+RMMSLRSTS+ RKVNT+ LQ
Sbjct: 132 VEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSANKSIKTQRMMSLRSTSSARKVNTLGLQ 191

Query: 275 EHIPVQYPEVVLSVEIYHNVRKNV-------KXXXXXXXXXXXXXXLRDKIYCSMDQVMQ 117
           EHIPVQ  EVVLSVEI+HN RK V       K              LRDKI CS DQVMQ
Sbjct: 192 EHIPVQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTDQVMQ 251

Query: 116 KAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLR 3
           KAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWL+
Sbjct: 252 KAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQ 289


>ref|XP_003606676.1| hypothetical protein MTR_4g064230 [Medicago truncatula]
           gi|355507731|gb|AES88873.1| hypothetical protein
           MTR_4g064230 [Medicago truncatula]
          Length = 402

 Score =  289 bits (740), Expect = 7e-76
 Identities = 166/271 (61%), Positives = 188/271 (69%), Gaps = 2/271 (0%)
 Frame = -2

Query: 809 SFPIPRGGPIYVPNMPASSSIRAPHFXXXXXXXXXXLEAEXXXXXXXXXXXXXXXXLKVF 630
           S  IPRGGPI+V NM +   +R P F          L++E                 KVF
Sbjct: 16  SISIPRGGPIFVSNM-SGPIVRVPLFQDSILTQLHSLQSELPPDSNHDISVDDL---KVF 71

Query: 629 TEDELMDMALKQVFEGRENNENYPPLLNQPNAGCH--EKNSKRKRSGTNNPILDSSCIEK 456
           TED+LMDMALKQVF+GR+NN++ P        GC   +K  +RK   TN PILDS+C EK
Sbjct: 72  TEDDLMDMALKQVFQGRDNNQDPPNAELNIGFGCRGQKKQLRRKSRLTNKPILDSNCKEK 131

Query: 455 VEKVVRIKQKQEEDKAAVRLHSFNPVCRINESAHKSVKTERMMSLRSTSATRKVNTVSLQ 276
           VE+VVRIKQKQEEDKA VRLHSF    +IN+SA+KS+KT+RMMSLRSTS+ RKVNT+ LQ
Sbjct: 132 VEEVVRIKQKQEEDKAQVRLHSF----QINKSANKSIKTQRMMSLRSTSSARKVNTLGLQ 187

Query: 275 EHIPVQYPEVVLSVEIYHNVRKNVKXXXXXXXXXXXXXXLRDKIYCSMDQVMQKAGQHDP 96
           EHIPVQ  EVVLSVEIYHN RK VK               RDKI CS DQVMQKAGQHDP
Sbjct: 188 EHIPVQDSEVVLSVEIYHNFRKGVKLSNAKKKNLSVL---RDKINCSTDQVMQKAGQHDP 244

Query: 95  SGYFLIEDVFYTDLRDPSAIDLTRPILDWLR 3
           SGYFLIEDVFYTDLRDPSAIDLTRPILDWL+
Sbjct: 245 SGYFLIEDVFYTDLRDPSAIDLTRPILDWLQ 275


>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score =  191 bits (486), Expect = 2e-46
 Identities = 117/274 (42%), Positives = 155/274 (56%), Gaps = 8/274 (2%)
 Frame = -2

Query: 800 IPRGGPIYVPNMPASSSIRAPHFXXXXXXXXXXLEAEXXXXXXXXXXXXXXXXLKVFTED 621
           +PRGGPIYVP+     + R P F          LEAE                 K+FTE+
Sbjct: 17  VPRGGPIYVPDFVGPIT-RVPEFLTSVVQHLQDLEAEISQAHDEVLSVDEL---KIFTEE 72

Query: 620 ELMDMALKQVFEGRENNENYPPLLNQ-PNAG----CHEKNSKRKRS--GTNNPILDSSCI 462
           EL+D A K+ F+  E  ++   L ++  NAG    C   N +++R     N+  ++ S  
Sbjct: 73  ELVDKAFKEAFKDSEGAQHSSQLSDENSNAGGERDCRNSNKRKRREMIDRNDFSVEDSYT 132

Query: 461 EKVEKVVRIKQKQEEDKAAVRLHSFNPVCRINESA-HKSVKTERMMSLRSTSATRKVNTV 285
            KV+++  IK KQ+EDKAA RLHSF+  C+INE A   S K ER+  LRS S+  KV + 
Sbjct: 133 AKVQQLAEIKHKQDEDKAAARLHSFDGSCKINECALPSSEKIERIKYLRSISSVTKVKSS 192

Query: 284 SLQEHIPVQYPEVVLSVEIYHNVRKNVKXXXXXXXXXXXXXXLRDKIYCSMDQVMQKAGQ 105
           ++  H+   Y + VL +EIYH+ R  VK              LRD I C+ DQVMQKAG+
Sbjct: 193 NIHGHVMEHYEDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQKAGK 252

Query: 104 HDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLR 3
           H+PSGY LIEDVF  DLRDPSAID ++PI DWLR
Sbjct: 253 HNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLR 286


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