BLASTX nr result

ID: Glycyrrhiza23_contig00029610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029610
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycin...   133   3e-29
ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]...   128   1e-27
gb|ACU23165.1| unknown [Glycine max]                                  126   4e-27
ref|XP_002513249.1| r2r3-myb transcription factor, putative [Ric...    67   2e-09
ref|XP_002325733.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07

>ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycine max]
           gi|255642080|gb|ACU21306.1| unknown [Glycine max]
          Length = 303

 Score =  133 bits (334), Expect = 3e-29
 Identities = 77/137 (56%), Positives = 87/137 (63%), Gaps = 20/137 (14%)
 Frame = -3

Query: 481 GFQLASGYA-----IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSIGLPSLQPAQVSP 317
           GFQL S  A     IGT+LV  + SNSSSGVTTEE+ PH QLNLDLSIGLPS QP Q S 
Sbjct: 170 GFQLVSNSAYANAKIGTNLVAAEDSNSSSGVTTEESVPHHQLNLDLSIGLPS-QP-QGSS 227

Query: 316 VNPDKLKXXXXXXXXXXQPKVMYQWYGNVSSGQGVCLCYGLGFQSNQPCCCKA------- 158
           +NP+KLK           P+V+Y+WYGN++S QGVCLCY LG QSNQ C CK        
Sbjct: 228 LNPEKLKPEPQEHDDQK-PQVLYKWYGNITSQQGVCLCYNLGLQSNQTCYCKTMGTATTT 286

Query: 157 --------YRFYRPMNI 131
                   YRFY PMNI
Sbjct: 287 TTATDSNLYRFYTPMNI 303


>ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]
           gi|110931656|gb|ABH02827.1| MYB transcription factor
           MYB56 [Glycine max]
          Length = 300

 Score =  128 bits (321), Expect = 1e-27
 Identities = 76/141 (53%), Positives = 88/141 (62%), Gaps = 24/141 (17%)
 Frame = -3

Query: 481 GFQLA--SGYA---IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSIGLPSLQPAQVSP 317
           GFQL   S YA   IGTD++  + SNSSSGVTTEE++PH QLNLDLSIGLPS QP   S 
Sbjct: 162 GFQLVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPS-QPQVSSS 220

Query: 316 VNPDKLKXXXXXXXXXXQPKVMYQWYG-NVSSGQGVCLCYGLGFQSNQPCCCKA------ 158
           +NP+KLK          +P+V+YQ YG N++  QGVCLCY LG QSNQ C CK       
Sbjct: 221 LNPEKLK-PEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQACYCKTMGTSTT 279

Query: 157 ------------YRFYRPMNI 131
                       YRFYRPMNI
Sbjct: 280 TVTTTTATDRNLYRFYRPMNI 300


>gb|ACU23165.1| unknown [Glycine max]
          Length = 302

 Score =  126 bits (316), Expect = 4e-27
 Identities = 75/141 (53%), Positives = 87/141 (61%), Gaps = 24/141 (17%)
 Frame = -3

Query: 481 GFQLA--SGYA---IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSIGLPSLQPAQVSP 317
           GFQL   S YA   IGTD++  + SNSSSGVTTEE++PH QLNLDLSIGLPS QP     
Sbjct: 164 GFQLVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPS-QPQVFFS 222

Query: 316 VNPDKLKXXXXXXXXXXQPKVMYQWYG-NVSSGQGVCLCYGLGFQSNQPCCCKA------ 158
           +NP+KLK          +P+V+YQ YG N++  QGVCLCY LG QSNQ C CK       
Sbjct: 223 LNPEKLK-PEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQACYCKTMGTSTT 281

Query: 157 ------------YRFYRPMNI 131
                       YRFYRPMNI
Sbjct: 282 TVTTTTATDRNLYRFYRPMNI 302


>ref|XP_002513249.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223547623|gb|EEF49117.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 269

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/97 (41%), Positives = 56/97 (57%)
 Frame = -3

Query: 454 IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSIGLPSLQPAQVSPVNPDKLKXXXXXXX 275
           +GTD   EDS N SSGVT EE YP  ++NL+LSIGLP  Q  Q+S ++  + K       
Sbjct: 167 VGTDTSAEDS-NCSSGVTMEEAYP--KINLELSIGLPHHQSPQISSISFTEQKQRNQQHQ 223

Query: 274 XXXQPKVMYQWYGNVSSGQGVCLCYGLGFQSNQPCCC 164
                  ++ +  + SS + +CLC  LGFQ+N+ C C
Sbjct: 224 HQ-----LFAYLFSGSSTKSICLCCSLGFQNNKICSC 255


>ref|XP_002325733.1| predicted protein [Populus trichocarpa] gi|222862608|gb|EEF00115.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
 Frame = -3

Query: 430 DSSNSSSGVTTE-ETYPHQQLNLDLSIGLPSLQPAQVSPVNPDKLKXXXXXXXXXXQPKV 254
           + SNSSSGVT E E +P+ +LNL+LSIGLP    +Q+S VN   L           +  V
Sbjct: 201 EDSNSSSGVTAELEVHPNHKLNLELSIGLPC--QSQLSSVN--DLNDSKQANQQHQEQVV 256

Query: 253 MYQWYGN----VSSGQGV-----CLC-YGLGFQSNQPC-CCKA----------YRFYRPM 137
            YQ +G      SS   V     CLC Y  GF+++Q C CC A          YRFYRP+
Sbjct: 257 TYQLFGTPATPTSSAPAVVHRTACLCSYNRGFKNSQACSCCNAVEKFVTADSLYRFYRPL 316

Query: 136 N 134
           +
Sbjct: 317 D 317


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