BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029596
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ...   163   1e-38
emb|CBI28186.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_002524479.1| pentatricopeptide repeat-containing protein,...   142   3e-32

>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/94 (85%), Positives = 90/94 (95%)
 Frame = +3

Query: 6   GMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRDA 185
           GML+DHVS TGAVSACGHM+NL+LGRQIHGL QKVGYGTHV+VCNVL+STYSKC V +DA
Sbjct: 273 GMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDA 332

Query: 186 KAVFQAMSNRNVVSWTTMISIEEEDAVSLFNAMR 287
           KAVF+++SNRNVVSWTTMISI+EEDAVSLFNAMR
Sbjct: 333 KAVFESISNRNVVSWTTMISIDEEDAVSLFNAMR 366



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/80 (38%), Positives = 46/80 (57%)
 Frame = +3

Query: 6   GMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRDA 185
           G+  D V++T A++ C        G Q+H L  K G G  V + N L++ YS+ G+L +A
Sbjct: 170 GIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEA 229

Query: 186 KAVFQAMSNRNVVSWTTMIS 245
           + VF  M  R++VSW  MIS
Sbjct: 230 RRVFDEMPERDLVSWNAMIS 249


>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344437|ref|XP_003636296.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|358345563|ref|XP_003636846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502231|gb|AES83434.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502781|gb|AES83984.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355521707|gb|AET02161.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/95 (82%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   QGMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRD 182
           +GMLLDHVS TGA+SACG+ +NL+ G+QIHGLAQK+GYGTHVAVCNVLISTYSKC VLRD
Sbjct: 284 EGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRD 343

Query: 183 AKAVFQAMSNRNVVSWTTMISIEEEDAVSLFNAMR 287
           AKAVFQ MS RNVVSWTT+ISI+EE+ VSLFNAMR
Sbjct: 344 AKAVFQDMSARNVVSWTTLISIDEENVVSLFNAMR 378



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
 Frame = +3

Query: 6   GMLLDHVSFTGAVSACGHMRNLD-----LGRQIHGLAQKVGYGTHVAVCNVLISTYSKCG 170
           G++ D V++T A+S C      D      G Q+H L  K G+G  V + N L++ YS+ G
Sbjct: 177 GVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWG 236

Query: 171 VLRDAKAVFQAMSNRNVVSWTTMIS 245
            L +A  VF  M+ R++VSW  M+S
Sbjct: 237 GLDEAGRVFNEMTIRDLVSWNAMLS 261


>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   QGMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRD 182
           +GM LDHVSFTGA+SACGH +  +LGRQIH LA K+GY THV VCNVLISTYSKC  + D
Sbjct: 249 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 308

Query: 183 AKAVFQAMSNRNVVSWTTMISIEEEDAVSLFNAMR 287
           AK VF+++ +RNVVSWTTMISI EEDA SLFN MR
Sbjct: 309 AKLVFESIIDRNVVSWTTMISISEEDATSLFNEMR 343


>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   QGMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRD 182
           +GM LDHVSFTGA+SACGH +  +LGRQIH LA K+GY THV VCNVLISTYSKC  + D
Sbjct: 272 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 331

Query: 183 AKAVFQAMSNRNVVSWTTMISIEEEDAVSLFNAMR 287
           AK VF+++ +RNVVSWTTMISI EEDA SLFN MR
Sbjct: 332 AKLVFESIIDRNVVSWTTMISISEEDATSLFNEMR 366



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%)
 Frame = +3

Query: 6   GMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRDA 185
           G+  D V+ T  ++ C        G Q+H    K G    V V N LI+ YS+C  L +A
Sbjct: 171 GVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEA 230

Query: 186 KAVFQAMSNRNVVSWTTMIS 245
           + VF  M N+++VSW  M+S
Sbjct: 231 RRVFDEMRNKDLVSWNAMLS 250


>ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536267|gb|EEF37919.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 576

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/95 (71%), Positives = 80/95 (84%)
 Frame = +3

Query: 3   QGMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRD 182
           +G+ LDHVSFT A+SACGH RNL++GRQ+HGL+ K GYG HV+V NVLISTYSKC ++ D
Sbjct: 272 RGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKCEIIED 331

Query: 183 AKAVFQAMSNRNVVSWTTMISIEEEDAVSLFNAMR 287
           AK VFQ M  RNVVSWTTMISI+EE+AVS FN MR
Sbjct: 332 AKLVFQNMLERNVVSWTTMISIDEENAVSFFNEMR 366



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
 Frame = +3

Query: 6   GMLLDHVSFTGAVSACGHMRNLDLGRQIHGLAQKVGYGTHVAVCNVLISTYSKCGVLRDA 185
           G++ D V++T  ++ C  +     G Q+H    KVG    V V N LI+ YS+ G L +A
Sbjct: 171 GVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEA 230

Query: 186 KAVFQAMSNRNVVSWTTMIS------IEEEDAVSLFNAM 284
             VF+ M   ++VSW  +IS      I   +A+S+F  M
Sbjct: 231 GRVFEEMQTTDLVSWNAIISGYTQAGIYGLEAISIFIEM 269