BLASTX nr result

ID: Glycyrrhiza23_contig00029579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029579
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ...    98   6e-19
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    94   9e-18
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...    94   1e-17
gb|ACU17851.1| unknown [Glycine max]                                   92   4e-17
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    92   6e-17

>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
           gi|355522814|gb|AET03268.1| hypothetical protein
           MTR_8g066780 [Medicago truncatula]
          Length = 356

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 65/128 (50%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
 Frame = -3

Query: 439 PALRAFSDLGNLH---RVIEIRDDEVYNNIIGSFTRSVSMDHSFQSGLFSVAHVMHHVNQ 269
           P+LRAFSDL NL    R+IEIRD+     +  S  RSVSMDHSFQ+G FS+  V++ +N+
Sbjct: 236 PSLRAFSDLCNLQGRERIIEIRDE-----VCESIGRSVSMDHSFQNG-FSIGDVLN-MNE 288

Query: 268 EEDDDG----GPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDRG 101
           +EDD                           RVLHCV+SP+A KRSFS+GRFS+GKIDRG
Sbjct: 289 DEDDSCEEGCSMDVSSSKISQGESSKSRYKRRVLHCVMSPIAMKRSFSNGRFSLGKIDRG 348

Query: 100 -RQGIVPV 80
            RQGI+PV
Sbjct: 349 KRQGILPV 356


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 66/128 (51%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
 Frame = -3

Query: 442 KPALRAFSDLGNL---HRVIEIRDDEVYNNIIGSFTRSVSMDHSFQSGL-FSVAHVMHHV 275
           K ALRA SDLGNL   H VIEIRD E Y++I     R+VSMDHSFQ G   S+A V+H V
Sbjct: 247 KSALRALSDLGNLRGRHSVIEIRD-EGYDSI----RRTVSMDHSFQRGSGLSIADVLH-V 300

Query: 274 NQEED---DDGGPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDR 104
           NQE +   +  GP                    VLHCVLSP+A KRSFSSGRFS+ +  R
Sbjct: 301 NQEHEGCSNGAGPSKNSRGESSKSSYRRK----VLHCVLSPIAMKRSFSSGRFSLSRNGR 356

Query: 103 GRQGIVPV 80
           GRQ ++PV
Sbjct: 357 GRQWVLPV 364


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 60/124 (48%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
 Frame = -3

Query: 442 KPALRAFSDLGNL---HRVIEIRD-DEVYNNIIGSFTRSVSMDHSFQSGLFSVAHV-MHH 278
           K   RA SDLGNL   H VIEIRD +E Y+    S  RS SMDHSFQSG+ +V  V + H
Sbjct: 250 KTEFRALSDLGNLRGRHSVIEIRDHNEDYHE---SIRRSFSMDHSFQSGVLNVDDVNVMH 306

Query: 277 VNQEEDDDGGPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDRGR 98
           +NQE+D   G                    +VLHCVLSP+A KRSFSSGRF + +  RGR
Sbjct: 307 MNQEQDCSQGEGSSKRLRGESESSKCSYRRKVLHCVLSPIAMKRSFSSGRFFLSRSGRGR 366

Query: 97  QGIV 86
            G++
Sbjct: 367 LGVL 370


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 65/128 (50%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
 Frame = -3

Query: 442 KPALRAFSDLGNL---HRVIEIRDDEVYNNIIGSFTRSVSMDHSFQSGL-FSVAHVMHHV 275
           K ALRA SDLGNL   H VIEIRD E Y++I     R+VSMDHSFQ G   S+A V+H V
Sbjct: 247 KSALRALSDLGNLRGRHSVIEIRD-EGYDSI----RRTVSMDHSFQRGSGLSIADVLH-V 300

Query: 274 NQEED---DDGGPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDR 104
           NQE +   +  GP                    VLHCVLSP+A KRSF SGRFS+ +  R
Sbjct: 301 NQEHEGCSNGAGPSKNSRGESSKSSYRRK----VLHCVLSPIAMKRSFFSGRFSLSRNGR 356

Query: 103 GRQGIVPV 80
           GRQ ++PV
Sbjct: 357 GRQWVLPV 364


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 64/128 (50%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
 Frame = -3

Query: 442 KPALRAFSDLGNL---HRVIEIRDDEVYNNIIGSFTRSVSMDHSFQSGL-FSVAHVMHHV 275
           K ALR  SDLGNL   H VIEIRD E Y++I     R+VSMDHSFQ G   S+A V+H V
Sbjct: 253 KSALRVLSDLGNLRGRHSVIEIRD-EGYDSI----RRTVSMDHSFQRGSGLSIADVLH-V 306

Query: 274 NQEED---DDGGPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDR 104
           NQE +   +  GP                    VLHCVLSP+A KRSFSSGRFS+ +  R
Sbjct: 307 NQEHEGCSNGAGPSKNSRGESSKSSYRRR----VLHCVLSPIAMKRSFSSGRFSLSRNGR 362

Query: 103 GRQGIVPV 80
           G+Q ++PV
Sbjct: 363 GKQWVLPV 370


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