BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029560
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512046.1| nucleic acid binding protein, putative [Rici...    60   1e-07
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    55   1e-06
emb|CAB10336.1| splicing factor like protein [Arabidopsis thalia...    57   2e-06
gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    55   6e-06
gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold ...    52   8e-06

>ref|XP_002512046.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549226|gb|EEF50715.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 244

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = -3

Query: 155 ISKEVRWKPPTVG*ITLNCDGAARGADGPSGCGGILRDRDG*WIGGY 15
           I K + W+PPT G + LN DGA RG DGP+  GG++RD  G WI G+
Sbjct: 71  IPKSISWEPPTTGCMKLNTDGAKRGEDGPAAAGGLIRDSRGRWIRGF 117


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = -3

Query: 143 VRWKPPTVG*ITLNCDGAARGADGPSGCGGILRDRDG*WIGGY 15
           + W  P  G + LNCDGA +G+   +GCGG+LRD DG WI GY
Sbjct: 626 IGWMRPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGY 668



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 300 CSTLWQ*RNQRTHNLQFVAPCRPWERIVKF 211
           C  LW  RN+    + F  P  P   I KF
Sbjct: 574 CWYLWNWRNKSIFEIGFQRPSNPTLVIQKF 603


>emb|CAB10336.1| splicing factor like protein [Arabidopsis thaliana]
           gi|7268306|emb|CAB78600.1| splicing factor like protein
           [Arabidopsis thaliana]
          Length = 559

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
 Frame = -3

Query: 203 LEVAKISSRVV---EAKCYISKEVRWKPPTVG*ITLNCDGAARGADGPSGCGGILRDRDG 33
           +EV K  + V    ++   + + + W  P  G + ++ DGA+RG  GP+  GG++RD DG
Sbjct: 3   IEVTKAHNLVAGGSQSVARVERHIAWTKPPEGWVKVSTDGASRGNPGPAAAGGVIRDEDG 62

Query: 32  *WIGGYA 12
            W+GG+A
Sbjct: 63  LWVGGFA 69


>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = -3

Query: 143 VRWKPPTVG*ITLNCDGAARGADGPSGCGGILRDRDG*WIGGYAR 9
           + WK P  G + LNCDGA +G    +GCGG+LR  DG WI G++R
Sbjct: 200 IDWKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSR 244


>gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 282

 Score = 52.4 bits (124), Expect(2) = 8e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = -3

Query: 143 VRWKPPTVG*ITLNCDGAARGADGPSGCGGILRDRDG*WIGGY 15
           + W  P  G + LNCDGA + +   +GCGG+LRD DG WI GY
Sbjct: 179 IGWMRPPFGWVKLNCDGAWKASGTFAGCGGLLRDSDGRWIKGY 221



 Score = 21.9 bits (45), Expect(2) = 8e-06
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 300 CSTLWQ*RNQRTHNLQFVAPCRPWERIVKF 211
           C  LW  RN+    + F  P  P   I KF
Sbjct: 127 CWYLWNWRNKSIFEIGFQRPSNPTLVIQKF 156