BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029524
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637015.1| Pentatricopeptide repeat-containing protein ...   104   7e-21
ref|XP_003613898.1| Pentatricopeptide repeat-containing protein ...   103   1e-20
ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CBI26347.3| unnamed protein product [Vitis vinifera]               80   1e-13

>ref|XP_003637015.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358347053|ref|XP_003637577.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502950|gb|AES84153.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355503512|gb|AES84715.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 823

 Score =  104 bits (260), Expect = 7e-21
 Identities = 64/119 (53%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 LDTNTLALAPPPRE-ICVPSKPTPQQALPHISPNATDPESRLKKLNLEKNDDSGLPNKRX 180
           L+ NTL+L  PPRE I +PSK + QQ L    PN  DPE+R K LNL KN D  + +   
Sbjct: 5   LEINTLSLVAPPRETISIPSKTSQQQPLLDY-PN--DPEARFKNLNLHKNADKRVNSN-- 59

Query: 179 XXXXXGYVLKHKNKVHTRCSTKWVSYGGRIPSILRALNTIQDLDEALRPWEESLSNKEM 3
                G+VLK KN VHT+CSTK V+Y GR+ +IL+AL+TI DLD+AL PWE+ L  KEM
Sbjct: 60  -----GFVLKKKN-VHTKCSTKCVNYNGRVLAILQALDTIHDLDKALGPWEKRLGKKEM 112


>ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515233|gb|AES96856.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 807

 Score =  103 bits (258), Expect = 1e-20
 Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 LDTNTLALAPPPRE-ICVPSKPTPQQALPHISPNATDPESRLKKLNLEKNDDSGLPNKRX 180
           L+ NTL+L  PPRE I +PSK + QQ L    PN  DPE+R K LNL KN      NKR 
Sbjct: 5   LEINTLSLVAPPRETISIPSKTSQQQPLLDY-PN--DPEARFKNLNLHKN-----ANKRV 56

Query: 179 XXXXXGYVLKHKNKVHTRCSTKWVSYGGRIPSILRALNTIQDLDEALRPWEESLSNKEM 3
                 +VLK KN VHT+CSTK V+Y GR+ +IL+AL+TI DLD+AL PWE+ L  KEM
Sbjct: 57  NSNG--FVLKKKN-VHTKCSTKCVNYNGRVLAILQALDTIHDLDKALGPWEKRLGKKEM 112


>ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 787

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 58/129 (44%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = -2

Query: 377 MLTKLQFLD---TNTLALAPPPREICVPSKPTPQQALPHISPNATDPESRLKKLNLEKND 207
           ML KLQ L    TNTL  +     + +P+  +    LPH SPN    E R KKLNLEKN 
Sbjct: 1   MLVKLQLLGFTFTNTLETS-----LSIPNITSHALPLPH-SPN----EHRPKKLNLEKN- 49

Query: 206 DSGLPNKRXXXXXXGYVLKHKNKVHTRCSTKWVSYGGRIPSILRALNTIQDLDEALRPWE 27
                                 KVH+ CSTKWVS+ G IP++LRALNT  DLD ALR WE
Sbjct: 50  ----------------------KVHSTCSTKWVSHCGSIPAVLRALNTTHDLDNALRQWE 87

Query: 26  E-SLSNKEM 3
           E +LS++E+
Sbjct: 88  EGTLSDREI 96


>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = -2

Query: 140 KVHTRCSTKWVSYGGRIPSILRALNTIQDLDEALRPWEESLSNKE 6
           KV T CSTKW+SYGG IPSILRAL T++DLDEAL PWEESLSNKE
Sbjct: 121 KVSTNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKE 165


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = -2

Query: 140 KVHTRCSTKWVSYGGRIPSILRALNTIQDLDEALRPWEESLSNKE 6
           KV T CSTKW+SYGG IPSILRAL T++DLDEAL PWEESLSNKE
Sbjct: 121 KVSTNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKE 165