BLASTX nr result

ID: Glycyrrhiza23_contig00029504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029504
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              219   2e-55
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, parti...   165   5e-39

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  219 bits (559), Expect = 2e-55
 Identities = 100/143 (69%), Positives = 120/143 (83%)
 Frame = -1

Query: 605 KRGVRKIPGCSSIFVDGKVHEFLVGKAMDVGYNRNVLFKLEEVVSRLKLEGYEPDLNQVF 426
           +RGV+KI GCSS+ V+GKVHEFL+GK +D  Y+  VL K+ EVVSRLKL+GYEPDL QV 
Sbjct: 474 QRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVL 533

Query: 425 LDIEDYEKESKLTLHSEKMALAFGLLSITQGIPIYIVKNLRICCDCHTFMQLVSKVYNRR 246
           LDIED  KES L LHSEKMA+AFGL+ I +  PI+IVKNLR+CCDCH FM+LVSKVYNR+
Sbjct: 534 LDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQ 593

Query: 245 VIVRDQNRFHHFDKGCCSCRNHW 177
           +I+RDQNRFHHF+ GCCSC  +W
Sbjct: 594 IIMRDQNRFHHFENGCCSCNEYW 616


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  219 bits (559), Expect = 2e-55
 Identities = 100/143 (69%), Positives = 120/143 (83%)
 Frame = -1

Query: 605 KRGVRKIPGCSSIFVDGKVHEFLVGKAMDVGYNRNVLFKLEEVVSRLKLEGYEPDLNQVF 426
           +RGV+KI GCSS+ V+GKVHEFL+GK +D  Y+  VL K+ EVVSRLKL+GYEPDL QV 
Sbjct: 462 QRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVL 521

Query: 425 LDIEDYEKESKLTLHSEKMALAFGLLSITQGIPIYIVKNLRICCDCHTFMQLVSKVYNRR 246
           LDIED  KES L LHSEKMA+AFGL+ I +  PI+IVKNLR+CCDCH FM+LVSKVYNR+
Sbjct: 522 LDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQ 581

Query: 245 VIVRDQNRFHHFDKGCCSCRNHW 177
           +I+RDQNRFHHF+ GCCSC  +W
Sbjct: 582 IIMRDQNRFHHFENGCCSCNEYW 604


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  167 bits (423), Expect = 1e-39
 Identities = 78/145 (53%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
 Frame = -1

Query: 605 KRGVRKIPGCSSIFVDGKVHEFLVGKAMDVGYNRN--VLFKLEEVVSRLKLEGYEPDLNQ 432
           +R ++K PGCS+I V G VHEF+ G   DV + ++  +   L++++ RLK  GY PD ++
Sbjct: 439 ERNIKKPPGCSAIEVGGVVHEFVKG---DVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 495

Query: 431 VFLDIEDYEKESKLTLHSEKMALAFGLLSITQGIPIYIVKNLRICCDCHTFMQLVSKVYN 252
           V  D+++ EKE++L+LHSEK+A+AFGLLS T G PI +VKNLR+C DCH+ M+ +S+VYN
Sbjct: 496 VLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYN 555

Query: 251 RRVIVRDQNRFHHFDKGCCSCRNHW 177
           R +IVRD+NRFHHF KG CSCR+ W
Sbjct: 556 REIIVRDRNRFHHFTKGSCSCRDFW 580


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  167 bits (423), Expect = 1e-39
 Identities = 78/145 (53%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
 Frame = -1

Query: 605 KRGVRKIPGCSSIFVDGKVHEFLVGKAMDVGYNRN--VLFKLEEVVSRLKLEGYEPDLNQ 432
           +R ++K PGCS+I V G VHEF+ G   DV + ++  +   L++++ RLK  GY PD ++
Sbjct: 570 ERNIKKPPGCSAIEVGGVVHEFVKG---DVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 626

Query: 431 VFLDIEDYEKESKLTLHSEKMALAFGLLSITQGIPIYIVKNLRICCDCHTFMQLVSKVYN 252
           V  D+++ EKE++L+LHSEK+A+AFGLLS T G PI +VKNLR+C DCH+ M+ +S+VYN
Sbjct: 627 VLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYN 686

Query: 251 RRVIVRDQNRFHHFDKGCCSCRNHW 177
           R +IVRD+NRFHHF KG CSCR+ W
Sbjct: 687 REIIVRDRNRFHHFTKGSCSCRDFW 711


>tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
          Length = 1822

 Score =  165 bits (418), Expect = 5e-39
 Identities = 77/142 (54%), Positives = 106/142 (74%)
 Frame = -1

Query: 602  RGVRKIPGCSSIFVDGKVHEFLVGKAMDVGYNRNVLFKLEEVVSRLKLEGYEPDLNQVFL 423
            +GV+K+PG S+I VDGKVHEF VG  +   YN   L  L E+  RL+L+GY  +  +V  
Sbjct: 1682 KGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELM-LAEMDRRLRLQGYTANTREVLF 1740

Query: 422  DIEDYEKESKLTLHSEKMALAFGLLSITQGIPIYIVKNLRICCDCHTFMQLVSKVYNRRV 243
            DIE+ EKE  ++LHSEK+ALAFGL+ + + + I IVKNLR+C DCH +++LVSKV+NR +
Sbjct: 1741 DIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREI 1800

Query: 242  IVRDQNRFHHFDKGCCSCRNHW 177
            ++RD+NRFHHF  G CSCR++W
Sbjct: 1801 VMRDRNRFHHFKGGECSCRDYW 1822


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