BLASTX nr result

ID: Glycyrrhiza23_contig00029468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029468
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine...   414   e-114
sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName:...   389   e-106
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              362   2e-98
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   362   2e-98
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   353   1e-95

>ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score =  414 bits (1064), Expect = e-114
 Identities = 199/208 (95%), Positives = 205/208 (98%)
 Frame = +1

Query: 1    ANDAGGRNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 180
            ANDAGGRNS+KCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD
Sbjct: 441  ANDAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 500

Query: 181  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 360
            NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK
Sbjct: 501  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 560

Query: 361  VPTFMVEFTTPIIRAFHSNGTKISFYSMPEYESWRESLGNNANGWKIKYYKGLGTSTPQE 540
            VP+FMVEFTTPIIRAFHSNGTK+SFYSMPEYESWRESLGNNA GWKIKYYKGLGTSTPQE
Sbjct: 561  VPSFMVEFTTPIIRAFHSNGTKLSFYSMPEYESWRESLGNNATGWKIKYYKGLGTSTPQE 620

Query: 541  GREYFRDLDKHRKDFVWEDELDGNAIEL 624
            GREYFRDLDKH+KDFVW+DE DG AIE+
Sbjct: 621  GREYFRDLDKHKKDFVWDDEQDGGAIEM 648


>sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
            II; AltName: Full=PsTopII gi|2330651|emb|CAA74891.1|
            topoisomerase II [Pisum sativum]
          Length = 1462

 Score =  389 bits (999), Expect = e-106
 Identities = 186/208 (89%), Positives = 198/208 (95%)
 Frame = +1

Query: 1    ANDAGGRNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 180
            AN+AGGRNS+KCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD
Sbjct: 431  ANEAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 490

Query: 181  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 360
            NEEIQNIKKILGLQQNKEYT+VKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK
Sbjct: 491  NEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 550

Query: 361  VPTFMVEFTTPIIRAFHSNGTKISFYSMPEYESWRESLGNNANGWKIKYYKGLGTSTPQE 540
            VP+F+VEFTTP+IRA H N T  SFYSMPEYE+W+E LGN+A  WKIKYYKGLGTSTPQE
Sbjct: 551  VPSFLVEFTTPVIRASHPNKTITSFYSMPEYEAWKERLGNSATSWKIKYYKGLGTSTPQE 610

Query: 541  GREYFRDLDKHRKDFVWEDELDGNAIEL 624
            GREYF DL +HRKDF+W+DELDGNAIEL
Sbjct: 611  GREYFSDLGRHRKDFIWDDELDGNAIEL 638


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  362 bits (930), Expect = 2e-98
 Identities = 169/208 (81%), Positives = 191/208 (91%)
 Frame = +1

Query: 1    ANDAGGRNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 180
            ANDAGGRNS+KCTLILTEGDSAKALAMAG+SVVGR+HYGVFPLRGKLLNVR+A  KQI++
Sbjct: 439  ANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYGVFPLRGKLLNVRDAQKKQILE 498

Query: 181  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 360
            N EIQNIK+ILGLQQ KEY S+KSLRYGHLMIM DQDHDGSHIKGLLINFIHSFWPSLLK
Sbjct: 499  NAEIQNIKQILGLQQGKEYDSIKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLK 558

Query: 361  VPTFMVEFTTPIIRAFHSNGTKISFYSMPEYESWRESLGNNANGWKIKYYKGLGTSTPQE 540
            +P+F+VEF TPI++A H NG  +SFYSMPEYESW+ESLG NA+GW IKYYKGLGTST +E
Sbjct: 559  IPSFLVEFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASGWSIKYYKGLGTSTSKE 618

Query: 541  GREYFRDLDKHRKDFVWEDELDGNAIEL 624
            G+EYF+DL KH+KDF+W DE DG+AIEL
Sbjct: 619  GKEYFKDLGKHKKDFMWVDEKDGDAIEL 646


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  362 bits (930), Expect = 2e-98
 Identities = 169/208 (81%), Positives = 191/208 (91%)
 Frame = +1

Query: 1    ANDAGGRNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 180
            ANDAGGRNS+KCTLILTEGDSAKALAMAG+SVVGR+HYGVFPLRGKLLNVR+A  KQI++
Sbjct: 439  ANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYGVFPLRGKLLNVRDAQKKQILE 498

Query: 181  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 360
            N EIQNIK+ILGLQQ KEY S+KSLRYGHLMIM DQDHDGSHIKGLLINFIHSFWPSLLK
Sbjct: 499  NAEIQNIKQILGLQQGKEYDSIKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLK 558

Query: 361  VPTFMVEFTTPIIRAFHSNGTKISFYSMPEYESWRESLGNNANGWKIKYYKGLGTSTPQE 540
            +P+F+VEF TPI++A H NG  +SFYSMPEYESW+ESLG NA+GW IKYYKGLGTST +E
Sbjct: 559  IPSFLVEFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASGWSIKYYKGLGTSTSKE 618

Query: 541  GREYFRDLDKHRKDFVWEDELDGNAIEL 624
            G+EYF+DL KH+KDF+W DE DG+AIEL
Sbjct: 619  GKEYFKDLGKHKKDFMWVDEKDGDAIEL 646


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  353 bits (907), Expect = 1e-95
 Identities = 165/208 (79%), Positives = 188/208 (90%)
 Frame = +1

Query: 1    ANDAGGRNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMD 180
            ANDAGGRNS+KCTLILTEGDSAKALAMAG+SVVGRDHYGVFPLRGKLLNVREAS KQ+ +
Sbjct: 435  ANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRGKLLNVREASHKQVSE 494

Query: 181  NEEIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLK 360
            N+EI+ IKKILGLQ  KEY SVKSLRYGHLMIM DQDHDGSHIKGLLINFIH+FWPSLLK
Sbjct: 495  NKEIEAIKKILGLQTGKEYDSVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHTFWPSLLK 554

Query: 361  VPTFMVEFTTPIIRAFHSNGTKISFYSMPEYESWRESLGNNANGWKIKYYKGLGTSTPQE 540
            VP+F++EF TPI++A H +G  +SFY+MPEYESWR+SLG N++GW IKYYKGLGTST +E
Sbjct: 555  VPSFLIEFITPIVKATHKSGKILSFYTMPEYESWRKSLGANSSGWSIKYYKGLGTSTSKE 614

Query: 541  GREYFRDLDKHRKDFVWEDELDGNAIEL 624
            G+EYF+DL KHRKDF+W D  DG +IEL
Sbjct: 615  GKEYFQDLQKHRKDFIWADNQDGESIEL 642


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