BLASTX nr result

ID: Glycyrrhiza23_contig00029466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029466
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627915.1| Mitochondrial inner membrane protease subuni...   186   2e-45
ref|XP_004134638.1| PREDICTED: mitochondrial inner membrane prot...   168   5e-40
ref|XP_003542793.1| PREDICTED: mitochondrial inner membrane prot...   162   2e-38
ref|NP_001236387.1| uncharacterized protein LOC100526949 [Glycin...   162   3e-38
ref|XP_002310653.1| predicted protein [Populus trichocarpa] gi|1...   158   5e-37

>ref|XP_003627915.1| Mitochondrial inner membrane protease subunit [Medicago truncatula]
           gi|355521937|gb|AET02391.1| Mitochondrial inner membrane
           protease subunit [Medicago truncatula]
           gi|388502086|gb|AFK39109.1| unknown [Medicago
           truncatula]
          Length = 162

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/125 (66%), Positives = 102/125 (81%)
 Frame = +2

Query: 2   TFGPSMLPTIDSKPSIFLAERITIRFGQVARGDIVIVRSPENPRKVVTKRIVGMEGDTVT 181
           T GPSMLPTID  PS++LAERI+ RFG+ A+GDIVI+RSP NPR  +TKR+VG+EGDT+T
Sbjct: 38  TIGPSMLPTIDVTPSLYLAERISPRFGKAAQGDIVILRSPRNPRMCITKRLVGLEGDTIT 97

Query: 182 YLPNPKYSANRKTVVVPKGHVWVQGDNIYNSRDSRYFGPVPYGHIESRIFWKLLPAKDFG 361
           Y+ +P     ++TVVVPKGHVW++GDN Y S DSR FGPVPYG IESR+FWK+ P KDFG
Sbjct: 98  YVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGPVPYGLIESRLFWKVSPLKDFG 157

Query: 362 PFWKR 376
            FW +
Sbjct: 158 SFWNK 162


>ref|XP_004134638.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
           gi|449433708|ref|XP_004134639.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
           gi|449505931|ref|XP_004162607.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
           gi|449505935|ref|XP_004162608.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
          Length = 175

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/125 (62%), Positives = 99/125 (79%)
 Frame = +2

Query: 2   TFGPSMLPTIDSKPSIFLAERITIRFGQVARGDIVIVRSPENPRKVVTKRIVGMEGDTVT 181
           T+GPSMLPT++      LAER++ RFG+V  GDIV+VRSPENPRKVV KR++GMEGD+VT
Sbjct: 44  TYGPSMLPTLNLTGDFVLAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVT 103

Query: 182 YLPNPKYSANRKTVVVPKGHVWVQGDNIYNSRDSRYFGPVPYGHIESRIFWKLLPAKDFG 361
           Y+ +PK S   +TVVVPKGHVW++GDNIY+SRDSR FG VPY  ++ +IFW++ P K FG
Sbjct: 104 YVVDPKNSDWSETVVVPKGHVWIEGDNIYDSRDSRNFGAVPYSLLQGKIFWRIWPPKSFG 163

Query: 362 PFWKR 376
              KR
Sbjct: 164 QLEKR 168


>ref|XP_003542793.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Glycine max]
          Length = 179

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/141 (53%), Positives = 102/141 (72%), Gaps = 16/141 (11%)
 Frame = +2

Query: 2   TFGPSMLPTIDSKPSIFLAERITIRFGQVARGDIVIVRSPENPRKVVTKRIVGMEGDTVT 181
           T+GPSMLPTID K ++FL E+I+ RFG+V  GDIV++R+P++PR  +TKR+VG+EGD+VT
Sbjct: 39  TYGPSMLPTIDLKTAVFLMEKISPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVT 98

Query: 182 YLPNPK---YSANR-------------KTVVVPKGHVWVQGDNIYNSRDSRYFGPVPYGH 313
           Y+ NP+   Y  +              KT+VVPKG VWV+GDN YNS DSR FGPVPY  
Sbjct: 99  YISNPETYEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNKYNSNDSRKFGPVPYDL 158

Query: 314 IESRIFWKLLPAKDFGPFWKR 376
           I+ ++FW++ P K FGPFW +
Sbjct: 159 IDGKMFWRITPLKKFGPFWNK 179


>ref|NP_001236387.1| uncharacterized protein LOC100526949 [Glycine max]
           gi|255631228|gb|ACU15981.1| unknown [Glycine max]
          Length = 179

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/141 (53%), Positives = 100/141 (70%), Gaps = 16/141 (11%)
 Frame = +2

Query: 2   TFGPSMLPTIDSKPSIFLAERITIRFGQVARGDIVIVRSPENPRKVVTKRIVGMEGDTVT 181
           T+GPSMLPTID K  +FL E+I+ RFG+V  GDIV++R+P++PR  +TKR+VG+EGD+VT
Sbjct: 39  TYGPSMLPTIDLKTGVFLMEKISPRFGKVTCGDIVVLRNPQHPRYFMTKRVVGLEGDSVT 98

Query: 182 YLPNPKYSA----------------NRKTVVVPKGHVWVQGDNIYNSRDSRYFGPVPYGH 313
           Y+ NP+ +                   KT+VVPKG VWV+GDN YNS DSR FGPVPY  
Sbjct: 99  YISNPETNEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNKYNSNDSRKFGPVPYDL 158

Query: 314 IESRIFWKLLPAKDFGPFWKR 376
           I+ ++FW++ P K FGPFW +
Sbjct: 159 IDGKMFWRITPLKKFGPFWNK 179


>ref|XP_002310653.1| predicted protein [Populus trichocarpa] gi|118482814|gb|ABK93323.1|
           unknown [Populus trichocarpa]
           gi|222853556|gb|EEE91103.1| predicted protein [Populus
           trichocarpa]
          Length = 171

 Score =  158 bits (399), Expect = 5e-37
 Identities = 70/120 (58%), Positives = 94/120 (78%)
 Frame = +2

Query: 5   FGPSMLPTIDSKPSIFLAERITIRFGQVARGDIVIVRSPENPRKVVTKRIVGMEGDTVTY 184
           +GPSMLPT +    + LAE+I+ + G+V  GDIV+V SP  PRK+VTKR+VG+EGD+VTY
Sbjct: 44  YGPSMLPTFNISGDLALAEKISHKLGKVGAGDIVLVTSPVEPRKIVTKRVVGVEGDSVTY 103

Query: 185 LPNPKYSANRKTVVVPKGHVWVQGDNIYNSRDSRYFGPVPYGHIESRIFWKLLPAKDFGP 364
           + +PK S   +T+VVPKGH+WV+GDNIY S+DSR FG V YG ++ ++FWK+ P KDFGP
Sbjct: 104 VVDPKNSDRTETIVVPKGHIWVEGDNIYKSKDSRNFGAVSYGLLQGKMFWKIWPPKDFGP 163


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