BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029439
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816...   224   6e-57
ref|XP_003621961.1| Pentatricopeptide repeat-containing protein ...   166   2e-39
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...   144   1e-32
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...   127   1e-27
ref|XP_002517262.1| pentatricopeptide repeat-containing protein,...   127   1e-27

>ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
          Length = 1122

 Score =  224 bits (571), Expect = 6e-57
 Identities = 118/184 (64%), Positives = 139/184 (75%), Gaps = 12/184 (6%)
 Frame = +2

Query: 2   SFLLLLR---RAGMHSMLLQAYHHLQSHHAFVPDTFSRNLLMDSLFRIGQPQLAL----S 160
           S L+LLR   RAGM++MLL+AYHHLQ+ +AFVPDTF+RNL+MD+LFR+G   LAL    S
Sbjct: 102 SQLVLLRIYSRAGMYAMLLEAYHHLQASYAFVPDTFARNLVMDALFRVGHSHLALTLTLS 161

Query: 161 VFEHTHPPNFFTFDIALLHLS-----NLYHHLPHITHILRLMLRTRYYPSSDSFHTLLNS 325
           +F HTHPPNFFTF I LLHLS     NL  +LPHI  ILRL+L   Y PS  +F  LLNS
Sbjct: 162 LFSHTHPPNFFTFHILLLHLSKLNNNNLNLYLPHIARILRLLLWAGYSPSPLTFQMLLNS 221

Query: 326 FCNRMNALPQAYQLLGLMVALGIDFSVGVWTILIHKYCKLGRLDVAAKMLHNMTRTGCSP 505
            C ++NA PQAYQLL LM ALGI+FSV +WTILIH YCK GRL +A  + HNM +TGCSP
Sbjct: 222 LC-KINAFPQAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNMLQTGCSP 280

Query: 506 NVVT 517
           NVVT
Sbjct: 281 NVVT 284


>ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496976|gb|AES78179.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  166 bits (420), Expect = 2e-39
 Identities = 85/176 (48%), Positives = 120/176 (68%), Gaps = 5/176 (2%)
 Frame = +2

Query: 5   FLLLLR---RAGMHSMLLQAYHHLQSHHAFV--PDTFSRNLLMDSLFRIGQPQLALSVFE 169
           F+ LLR   R+G H +L++   ++   H F     TF+ NLLM+SLF+  QP+ A  +F 
Sbjct: 78  FINLLRIFSRSGNHELLIKTCDYMVEFHGFQISSKTFASNLLMESLFKASQPKNAFKIFG 137

Query: 170 HTHPPNFFTFDIALLHLSNLYHHLPHITHILRLMLRTRYYPSSDSFHTLLNSFCNRMNAL 349
            T  PNF TF+IAL HLSN ++ + ++ ++LR MLR RY P++ +F  +LN+FC +MNA 
Sbjct: 138 ETRSPNFLTFNIALFHLSN-FNDIVNVKYVLREMLRLRYCPNASTFSAVLNAFC-KMNAF 195

Query: 350 PQAYQLLGLMVALGIDFSVGVWTILIHKYCKLGRLDVAAKMLHNMTRTGCSPNVVT 517
            Q YQ+LGLM+ LGI+ SV VWT+LIH +CKLG+LDVA  +   M ++ CSPN VT
Sbjct: 196 RQVYQILGLMIGLGIELSVNVWTVLIHHFCKLGKLDVADDLFDKMIQSCCSPNSVT 251


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/175 (42%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SFLLLLR---RAGMHSMLLQAYHHLQSHHAFVPDTFSRNLLMDSLFRIGQPQLALSVFEH 172
           +FLLLLR   R GM+ ++ +A+ H+   + F P+TF+RN++MD LF++G+  +AL VF+ 
Sbjct: 133 TFLLLLRIYWRGGMYDLVFEAFDHMD-RYGFTPNTFARNVIMDVLFKVGRADVALKVFKE 191

Query: 173 THPPNFFTFDIALLHLSNLYHHLPHITHILRLMLRTRYYPSSDSFHTLLNSFCNRMNALP 352
           T  PNF TF+I L +LS     L  I    R MLR  Y P+  +F  +LN  C ++  L 
Sbjct: 192 TLLPNFLTFNIVLCNLSKT-KDLIGIGDTFRCMLRMGYCPNPGTFEVVLNGLC-KLGRLA 249

Query: 353 QAYQLLGLMVALGIDFSVGVWTILIHKYCKLGRLDVAAKMLHNMTRTGCSPNVVT 517
           +AYQ+ G+M   GI  SV +WTI+I  +C+L R + A+ ++  M ++GCSPN+VT
Sbjct: 250 EAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSPNIVT 304


>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  127 bits (318), Expect = 1e-27
 Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SFLLLLR---RAGMHSMLLQAYHHLQSHHAFVPDTFSRNLLMDSLFRIGQPQLALSVFEH 172
           +FLLLLR   R  ++ ++   Y  + +   +VP+ F  N+++D LF+I + ++AL   + 
Sbjct: 127 TFLLLLRICWRGKLYGLVFDVYEEMIAF-GYVPNAFVCNVIIDVLFKIKRGEVALKFLKE 185

Query: 173 THPPNFFTFDIALLHLSNLYHHLPHITHILRLMLRTRYYPSSDSFHTLLNSFCNRMNALP 352
           T   NF TF IAL +L  L + L  +  +LR+MLR  Y PS + F  +LN FC ++    
Sbjct: 186 TRVSNFLTFSIALCNLCRL-NDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFC-KVGRFA 243

Query: 353 QAYQLLGLMVALGIDFSVGVWTILIHKYCKLGRLDVAAKMLHNMTRTGCSPNVVT 517
           +A+Q+LGLM  LGI  SV VW+ILI  Y ++G++  A  +L  M  TGCSPNVVT
Sbjct: 244 EAFQVLGLMATLGIPISVTVWSILIDGYRRIGKIGRAGNLLEKMVETGCSPNVVT 298


>ref|XP_002517262.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543633|gb|EEF45162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 321

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SFLLLLR---RAGMHSMLLQAYHHLQSHHAFVPDTFSRNLLMDSLFRIGQPQLALSVFEH 172
           +FLLLLR   R GM+SM+ + +  +     F P+TF+ N++MD LF+IGQ    + + + 
Sbjct: 78  TFLLLLRIYWRGGMYSMVFETFEQM-GRFGFEPNTFAHNVVMDVLFKIGQVDTGIKILKE 136

Query: 173 THPPNFFTFDIALLHLSNLYHHLPHITHILRLMLRTRYYPSSDSFHTLLNSFCNRMNALP 352
              PNF +++IAL +L  L + L  +   LR+ML   YYP+ ++F  +LN  C ++  L 
Sbjct: 137 MKSPNFLSYNIALTNLCKL-NDLVKVKKALRIMLSKGYYPNVETFEMVLNCCC-KLGRLV 194

Query: 353 QAYQLLGLMVALGIDFSVGVWTILIHKYCKLGRLDVAAKMLHNMTRTGCSPNVVT 517
           +A QLL +M+ +GI  SV  W+ILI   C+L + ++A  ++  M  + CSPNVVT
Sbjct: 195 EACQLLAMMITVGISLSVSAWSILIDWLCRLNQPNMAFHLMERMVDSSCSPNVVT 249