BLASTX nr result

ID: Glycyrrhiza23_contig00029431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029431
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   221   5e-56
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   218   4e-55
ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...   215   3e-54
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   209   1e-52
emb|CBI36629.3| unnamed protein product [Vitis vinifera]              208   4e-52

>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score =  221 bits (563), Expect = 5e-56
 Identities = 112/141 (79%), Positives = 120/141 (85%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   RDPDDYDNVTAXXXXXXXXXXXXDSGVDQSFLDTLPVFLYKAIIGLKN-PFDCAVCLCEF 178
           R+PD+ DNVTA            D+GVDQSF+DTLPVFLYKAIIGLK  PFDCAVCLCEF
Sbjct: 82  REPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKKYPFDCAVCLCEF 141

Query: 179 EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSSPNSNCSPIVLVLESGS 358
           EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRA+LLPEFS+ N+ CSPIVLVLESGS
Sbjct: 142 EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRATLLPEFSASNA-CSPIVLVLESGS 200

Query: 359 DNSSREIVPERD--AAAVGRT 415
             SSREIVPER+  AAAVGRT
Sbjct: 201 SESSREIVPEREPAAAAVGRT 221


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  218 bits (555), Expect = 4e-55
 Identities = 109/138 (78%), Positives = 117/138 (84%)
 Frame = +2

Query: 2   RDPDDYDNVTAXXXXXXXXXXXXDSGVDQSFLDTLPVFLYKAIIGLKNPFDCAVCLCEFE 181
           RDPDD DNVTA            D+GVDQSF+DTLPVF YKAIIGLKNPFDCAVCLCEFE
Sbjct: 83  RDPDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFHYKAIIGLKNPFDCAVCLCEFE 142

Query: 182 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSSPNSNCSPIVLVLESGSD 361
           PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLLPEFSS NS+CSP+VLVLESGS+
Sbjct: 143 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPEFSS-NSSCSPVVLVLESGSE 201

Query: 362 NSSREIVPERDAAAVGRT 415
            SSREI+ +RD   +GRT
Sbjct: 202 -SSREIITDRD--NIGRT 216


>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score =  215 bits (548), Expect = 3e-54
 Identities = 109/141 (77%), Positives = 116/141 (82%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   RDPDDYDNVTAXXXXXXXXXXXXDSGVDQSFLDTLPVFLYKAIIGLKN-PFDCAVCLCEF 178
           R+PD+ DNVTA            D+GVDQSF+DTLPVFLYKAIIGLK  PFDCAVCLCEF
Sbjct: 74  REPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKKYPFDCAVCLCEF 133

Query: 179 EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSSPNSNCSPIVLVLESGS 358
           EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP+  S  + CSPIVLVLESGS
Sbjct: 134 EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDQFSATNACSPIVLVLESGS 193

Query: 359 DNSSREIVPER--DAAAVGRT 415
             SSREIVPER   +AAVGRT
Sbjct: 194 SESSREIVPERVGASAAVGRT 214


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/133 (78%), Positives = 112/133 (84%)
 Frame = +2

Query: 2   RDPDDYDNVTAXXXXXXXXXXXXDSGVDQSFLDTLPVFLYKAIIGLKNPFDCAVCLCEFE 181
           R+P+D DNVTA            D+GVDQSF+DTLPVFLYKAIIG KNPFDCAVCLCEFE
Sbjct: 123 REPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFE 182

Query: 182 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSSPNSNCSPIVLVLESGSD 361
            EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP+F SPN  CSPIVLVLESGS+
Sbjct: 183 AEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDF-SPNDICSPIVLVLESGSE 241

Query: 362 NSSREIVPERDAA 400
            SSREIV +R +A
Sbjct: 242 -SSREIVSDRHSA 253


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  208 bits (529), Expect = 4e-52
 Identities = 103/133 (77%), Positives = 111/133 (83%)
 Frame = +2

Query: 2   RDPDDYDNVTAXXXXXXXXXXXXDSGVDQSFLDTLPVFLYKAIIGLKNPFDCAVCLCEFE 181
           R+P+D DNVTA            D+GVDQSF+DTLPVFLYKAIIG KNPFDCAVCLCEFE
Sbjct: 123 REPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFE 182

Query: 182 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSSPNSNCSPIVLVLESGSD 361
            EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLLP+F SPN  CSPIVLVLESGS+
Sbjct: 183 AEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDF-SPNDICSPIVLVLESGSE 241

Query: 362 NSSREIVPERDAA 400
            SSREIV +R +A
Sbjct: 242 -SSREIVSDRHSA 253


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