BLASTX nr result

ID: Glycyrrhiza23_contig00029428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029428
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...   120   1e-25
ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   111   7e-23
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...   105   3e-21
ref|XP_003533468.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   103   1e-20

>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/95 (63%), Positives = 64/95 (67%)
 Frame = -3

Query: 313 HHRHEEEQESPLIPGLPDHIAQLCLSPVHSSLLFKVCHSWRRLIYSPSFPPFLSLYAILS 134
           +H H   Q   LIPGLPDHIAQLCLS ++ SLLFKVCHSWRRLIYSPSFPPF SLYAILS
Sbjct: 30  YHHHHNHQHDLLIPGLPDHIAQLCLSSINPSLLFKVCHSWRRLIYSPSFPPFFSLYAILS 89

Query: 133 XXXXXXXXXXXXXXXXXNSIQFHTFDPISNHWHTL 29
                            +SIQFH FDPISN W  L
Sbjct: 90  ----------PPKSHHSHSIQFHNFDPISNTWKIL 114


>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/99 (60%), Positives = 64/99 (64%)
 Frame = -3

Query: 334 KRQKLLFHHRHEEEQESPLIPGLPDHIAQLCLSPVHSSLLFKVCHSWRRLIYSPSFPPFL 155
           KRQK   H   +EEQ  PLIPGLPDHIAQLCLS ++  LLF + HSWRRLIYSPSFPPF 
Sbjct: 18  KRQKQEQHIHQQEEQ--PLIPGLPDHIAQLCLSSINPCLLFSISHSWRRLIYSPSFPPFF 75

Query: 154 SLYAILSXXXXXXXXXXXXXXXXXNSIQFHTFDPISNHW 38
           SLYAILS                   IQFHTFDPIS  W
Sbjct: 76  SLYAILSHSHSSAV------------IQFHTFDPISATW 102


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/102 (57%), Positives = 67/102 (65%)
 Frame = -3

Query: 334 KRQKLLFHHRHEEEQESPLIPGLPDHIAQLCLSPVHSSLLFKVCHSWRRLIYSPSFPPFL 155
           +RQ +   HRH E+   PLIPGLP+ IAQLCLS VH S L+ VCHSWRRLIYSPSFPPF 
Sbjct: 20  RRQLITDGHRHLEQ---PLIPGLPNDIAQLCLSLVHPSTLYSVCHSWRRLIYSPSFPPFF 76

Query: 154 SLYAILSXXXXXXXXXXXXXXXXXNSIQFHTFDPISNHWHTL 29
           SLYA+LS                 NSIQF  FDPIS+ W +L
Sbjct: 77  SLYAVLS------STNTNHNLPDNNSIQFFNFDPISSRWDSL 112


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/102 (56%), Positives = 67/102 (65%)
 Frame = -3

Query: 334 KRQKLLFHHRHEEEQESPLIPGLPDHIAQLCLSPVHSSLLFKVCHSWRRLIYSPSFPPFL 155
           KRQ+L   H    +Q+  LIPGLPDH+AQLCLS V  SLL+ VCHSWRRLIYSP+FPPFL
Sbjct: 16  KRQRLTRLH----QQQPDLIPGLPDHVAQLCLSLVPPSLLYSVCHSWRRLIYSPAFPPFL 71

Query: 154 SLYAILSXXXXXXXXXXXXXXXXXNSIQFHTFDPISNHWHTL 29
           SLYA+LS                 NSI+F  FDPIS+ W  L
Sbjct: 72  SLYAVLS------SINTDRYGDCSNSIKFFNFDPISSTWDLL 107


>ref|XP_003533468.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 304

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/99 (55%), Positives = 63/99 (63%)
 Frame = -3

Query: 334 KRQKLLFHHRHEEEQESPLIPGLPDHIAQLCLSPVHSSLLFKVCHSWRRLIYSPSFPPFL 155
           KRQK       + E++ PLIPGLPDHIA+LCLS ++ SLLF + HS RRLIYSPSFPPF 
Sbjct: 11  KRQKQHDDDDDDVEEQQPLIPGLPDHIAELCLSSINHSLLFSISHSCRRLIYSPSFPPFF 70

Query: 154 SLYAILSXXXXXXXXXXXXXXXXXNSIQFHTFDPISNHW 38
           SLYAILS                  +I FHTFDPIS  W
Sbjct: 71  SLYAILS--------------HSSATIHFHTFDPISATW 95


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