BLASTX nr result

ID: Glycyrrhiza23_contig00029423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029423
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc...    74   9e-12
ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arab...    70   2e-10
emb|CBI26657.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti...    70   2e-10
ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis t...    70   2e-10

>ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
          Length = 882

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = -1

Query: 164 GSKLMTAEQSKFMIDLHQIGMMLRHATSRSMCLADEFGEANI 39
           GS+LMTAEQS FMIDLHQIGMMLRHATSRS+CL DEFG+  +
Sbjct: 613 GSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTL 654


>ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
           lyrata] gi|297329086|gb|EFH59505.1| hypothetical protein
           ARALYDRAFT_479572 [Arabidopsis lyrata subsp. lyrata]
          Length = 807

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -1

Query: 164 GSKLMTAEQSKFMIDLHQIGMMLRHATSRSMCLADEFGEANI 39
           GSK MTAEQS FMIDLHQ+GMMLR ATSRS+CL DEFG+  +
Sbjct: 613 GSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTL 654


>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -1

Query: 164 GSKLMTAEQSKFMIDLHQIGMMLRHATSRSMCLADEFGEANI 39
           GSK MTAEQS FMIDLHQ+GMMLRHA SRS+CL DEFG+  +
Sbjct: 599 GSKPMTAEQSTFMIDLHQVGMMLRHANSRSLCLLDEFGKGTL 640


>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
          Length = 807

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -1

Query: 164 GSKLMTAEQSKFMIDLHQIGMMLRHATSRSMCLADEFGEANI 39
           GSK MTAEQS FMIDLHQ+GMMLRHA SRS+CL DEFG+  +
Sbjct: 613 GSKPMTAEQSTFMIDLHQVGMMLRHANSRSLCLLDEFGKGTL 654


>ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
           gi|395406789|sp|F4JEP5.1|MSH5_ARATH RecName: Full=DNA
           mismatch repair protein MSH5; Short=AtMSH5; AltName:
           Full=MutS protein homolog 5 gi|332642863|gb|AEE76384.1|
           DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
          Length = 807

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -1

Query: 164 GSKLMTAEQSKFMIDLHQIGMMLRHATSRSMCLADEFGEANI 39
           GSK MTAEQS FMIDLHQ+GMMLR ATSRS+CL DEFG+  +
Sbjct: 613 GSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTL 654


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