BLASTX nr result

ID: Glycyrrhiza23_contig00029415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029415
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605629.1| TATA-binding protein-associated factor [Medi...    93   3e-17
ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,...    92   4e-17
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...    91   7e-17
ref|XP_002319739.1| chromatin remodeling complex subunit [Populu...    87   1e-15
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...    84   9e-15

>ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
            gi|355506684|gb|AES87826.1| TATA-binding
            protein-associated factor [Medicago truncatula]
          Length = 1477

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = -3

Query: 433  EDNTDGDTKLVGSGKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG 290
            EDN+DGD KL+GSGKG+KAILGGLE+LWDQSQYTEEYNL+QFLAKLNG
Sbjct: 1430 EDNSDGDPKLLGSGKGMKAILGGLEDLWDQSQYTEEYNLSQFLAKLNG 1477


>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
            communis] gi|223536691|gb|EEF38332.1| TATA-binding
            protein-associated factor MOT1, putative [Ricinus
            communis]
          Length = 1920

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = -3

Query: 481  ASAEIXXXXXXXXXXSEDNTDGDTKLVGSGKGLKAILGGLEELWDQSQYTEEYNLNQFLA 302
            ASAE           S+ N+DGD KL+G+GKGLKAILGGLEELWDQSQYTEEYNLNQFL 
Sbjct: 1857 ASAETNTKGSTALKRSDGNSDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLNQFLV 1916

Query: 301  KLNG 290
            KLNG
Sbjct: 1917 KLNG 1920


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/64 (70%), Positives = 50/64 (78%)
 Frame = -3

Query: 481  ASAEIXXXXXXXXXXSEDNTDGDTKLVGSGKGLKAILGGLEELWDQSQYTEEYNLNQFLA 302
            ASAE            E+N+DGD KLVGSGKGLK+ILGGLEELWDQSQYTEEYNL+ FLA
Sbjct: 1984 ASAETSKKGASVVKSPENNSDGDAKLVGSGKGLKSILGGLEELWDQSQYTEEYNLSLFLA 2043

Query: 301  KLNG 290
            +LNG
Sbjct: 2044 RLNG 2047


>ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222858115|gb|EEE95662.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2045

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -3

Query: 481  ASAEIXXXXXXXXXXSEDNTDGDTKLVGSGKGLKAILGGLEELWDQSQYTEEYNLNQFLA 302
            ASAE           ++ + DGD KL+G+GKGLKAILGGLEELWDQSQYTEEYNL+QFL+
Sbjct: 1982 ASAETRAKGATASKRTDGSFDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLSQFLS 2041

Query: 301  KLNG 290
            KLNG
Sbjct: 2042 KLNG 2045


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/63 (68%), Positives = 45/63 (71%)
 Frame = -3

Query: 478  SAEIXXXXXXXXXXSEDNTDGDTKLVGSGKGLKAILGGLEELWDQSQYTEEYNLNQFLAK 299
            SAE           S+ N DGD K VGSGKGLKAILGGLEELWD SQYTEEYNL+ FL K
Sbjct: 1998 SAEALKKGAAQSKRSDGNFDGDPKFVGSGKGLKAILGGLEELWDHSQYTEEYNLSNFLTK 2057

Query: 298  LNG 290
            LNG
Sbjct: 2058 LNG 2060


Top