BLASTX nr result

ID: Glycyrrhiza23_contig00029379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029379
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542108.1| PREDICTED: uncharacterized protein LOC547764...   207   7e-52
ref|XP_003546938.1| PREDICTED: uncharacterized protein LOC100778...   206   2e-51
gb|AAU04617.1| CENP-C [Medicago truncatula]                           200   9e-50
ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb...   178   5e-43
ref|XP_002517519.1| hypothetical protein RCOM_0894640 [Ricinus c...   100   9e-20

>ref|XP_003542108.1| PREDICTED: uncharacterized protein LOC547764 [Glycine max]
          Length = 817

 Score =  207 bits (527), Expect = 7e-52
 Identities = 105/165 (63%), Positives = 129/165 (78%), Gaps = 4/165 (2%)
 Frame = -3

Query: 485 VVLEKLSVPDLPDNQVIDLKSLRGNMSKPRKVLSNIDNLLKGKK----DKTPLRQDVGCA 318
           + LEK SVPD PD Q++DLKSL+GN SKPRK LS+IDNLLKG       KTPL++ V C 
Sbjct: 274 IALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMSMNMNKKTPLKKAVQCP 333

Query: 317 VQQLASPTPPRSPFAMLSSLQKHISRSKPSVDPFSAHEIDHVSTRDYSPTRTINQEFDLV 138
           VQQLASPTPPRSPFA LS LQKHIS+SK S+DPFSAHEIDH+S+++YSPT  +N E +LV
Sbjct: 334 VQQLASPTPPRSPFASLSLLQKHISQSKQSMDPFSAHEIDHLSSKNYSPTHMVNPELNLV 393

Query: 137 GSGKPSNELNEDVIENVVAVSETNTVLETFRNCTSTSENSKEDNS 3
            S  PSNELN  +IE+ +AV + +TVL+T RN T++SE  KE+ S
Sbjct: 394 RSANPSNELNAHMIEDAIAVGKASTVLDTDRNDTNSSEIPKEEKS 438


>ref|XP_003546938.1| PREDICTED: uncharacterized protein LOC100778037 [Glycine max]
          Length = 805

 Score =  206 bits (524), Expect = 2e-51
 Identities = 108/163 (66%), Positives = 129/163 (79%), Gaps = 2/163 (1%)
 Frame = -3

Query: 485 VVLEKLSVPDLPDNQVIDLKSLRGNMSKPRKVLSNIDNLLKGKK--DKTPLRQDVGCAVQ 312
           + LEK SVPD PD Q++DLKSL+GN SKPRK LS+IDNLLKG     KTPL++ V C  Q
Sbjct: 276 IALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMNMNKKTPLKKAVQCPGQ 335

Query: 311 QLASPTPPRSPFAMLSSLQKHISRSKPSVDPFSAHEIDHVSTRDYSPTRTINQEFDLVGS 132
           QLASPTPPRSPFA LS LQ+HISRSK SVDPFSAHEID++S+++YS T T+N E +L GS
Sbjct: 336 QLASPTPPRSPFASLSLLQRHISRSKQSVDPFSAHEIDNLSSKNYSLTHTVNPELNLAGS 395

Query: 131 GKPSNELNEDVIENVVAVSETNTVLETFRNCTSTSENSKEDNS 3
           G  SNELN  +IE+V AV +T+TVL+T RN T+TSE  KED S
Sbjct: 396 GNLSNELNAHMIEDVHAVGKTSTVLDTDRNGTNTSEIPKEDYS 438


>gb|AAU04617.1| CENP-C [Medicago truncatula]
          Length = 697

 Score =  200 bits (509), Expect = 9e-50
 Identities = 107/161 (66%), Positives = 122/161 (75%)
 Frame = -3

Query: 485 VVLEKLSVPDLPDNQVIDLKSLRGNMSKPRKVLSNIDNLLKGKKDKTPLRQDVGCAVQQL 306
           +V EKLSVPD PD Q IDLK LR N SKPRK LSNIDNLL     KTPLR+DVG   +QL
Sbjct: 278 IVFEKLSVPDFPDIQPIDLKFLRENSSKPRKALSNIDNLLNRIDIKTPLRRDVGYTEKQL 337

Query: 305 ASPTPPRSPFAMLSSLQKHISRSKPSVDPFSAHEIDHVSTRDYSPTRTINQEFDLVGSGK 126
            SPTPPRSPFA LS LQK I RSKPSVDPFSAHEIDH+S R+ SPT TINQE ++VGS K
Sbjct: 338 GSPTPPRSPFASLSKLQKQILRSKPSVDPFSAHEIDHISKRNSSPTDTINQEVNIVGSSK 397

Query: 125 PSNELNEDVIENVVAVSETNTVLETFRNCTSTSENSKEDNS 3
           P++EL+  VIE+V+A  ETNT+L+       TSE SKE+ S
Sbjct: 398 PADELSAPVIEDVIAAGETNTILD-------TSEKSKEEVS 431


>ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb|AES76003.1| CENP-C
           [Medicago truncatula]
          Length = 641

 Score =  178 bits (451), Expect = 5e-43
 Identities = 99/163 (60%), Positives = 114/163 (69%), Gaps = 2/163 (1%)
 Frame = -3

Query: 485 VVLEKLSVPDLPDNQVIDLKSLRGNMSKPRK--VLSNIDNLLKGKKDKTPLRQDVGCAVQ 312
           +V EKLSVPD  D Q IDLKSL+G +SKP K    S++DN LKG   +TPLR+ VG A +
Sbjct: 231 IVFEKLSVPDFLDIQPIDLKSLQGTLSKPSKGKAFSDVDNWLKGMNIQTPLRRSVGYAEK 290

Query: 311 QLASPTPPRSPFAMLSSLQKHISRSKPSVDPFSAHEIDHVSTRDYSPTRTINQEFDLVGS 132
           QLASPTPP+SPFA LSSLQKHISRSK S DPFS HEID V TR YSP    +QE D+VGS
Sbjct: 291 QLASPTPPKSPFASLSSLQKHISRSKLSTDPFSTHEIDLVPTRSYSPIHMADQEVDIVGS 350

Query: 131 GKPSNELNEDVIENVVAVSETNTVLETFRNCTSTSENSKEDNS 3
            K S+EL     E+V+A  E NT+ E       TSENSKE NS
Sbjct: 351 SKLSDELTAPTTEDVIAAGEKNTIPE-------TSENSKEHNS 386


>ref|XP_002517519.1| hypothetical protein RCOM_0894640 [Ricinus communis]
           gi|223543151|gb|EEF44683.1| hypothetical protein
           RCOM_0894640 [Ricinus communis]
          Length = 888

 Score =  100 bits (250), Expect = 9e-20
 Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
 Frame = -3

Query: 479 LEKLSVPDLPDNQVIDLKSLRGNMSKPRKVLSNIDNLLKGKKDKTPLRQDVGCAVQQLAS 300
           +EKL++P+L D Q ID K+   N+ K R + S+I +L++G + KTP +     +     S
Sbjct: 313 IEKLNLPELQDIQRIDFKASGVNLPKSRNIFSDITHLMRGTRSKTPTKMKNAESTANFGS 372

Query: 299 PTPPRSPFAMLSSLQKHISRSKPSVDPFSAHEIDHVSTRDYSPTRTINQEFDLVG----- 135
           PTPP+SP A L  L+K I +S PS DPFSA +ID   TR+ S    I +  D VG     
Sbjct: 373 PTPPKSPLASLLLLKKRIFQSNPSNDPFSADDIDQSPTRNASHVENITKNSDPVGVEKML 432

Query: 134 --SGKPSNELNEDVIENVVAVSETNTVLETFRNCTSTSENSKEDN 6
             SG  + ++NE+    V ++S T   +E F   TS  +   ++N
Sbjct: 433 DMSGNLNPQINEENDGAVGSMSSTKVAIEDF---TSLFKKHADEN 474


Top