BLASTX nr result

ID: Glycyrrhiza23_contig00029374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029374
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34874.1| unknown [Lotus japonicus]                               94   9e-18
gb|AFK35294.1| unknown [Medicago truncatula]                           93   3e-17
ref|XP_003598460.1| Sigma factor binding protein [Medicago trunc...    92   6e-17
ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783...    71   1e-10
ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago ...    70   1e-10

>gb|AFK34874.1| unknown [Lotus japonicus]
          Length = 120

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 61/111 (54%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 MLGVNNNHVMVXXXXXXXXXXXXXKVTYISSPMKVKTSASNFRALVQELTGKYSNVAEMF 153
           MLGV+NNHVM              KVTYISSPMKVKTSASNFRALVQELTG+ SNVAE F
Sbjct: 1   MLGVSNNHVM-KGKRQGKKNKKEIKVTYISSPMKVKTSASNFRALVQELTGQDSNVAETF 59

Query: 152 VGVNGGAHHHDHIGVHNGTSTQQYWGSNSGEAYLPDESA-WMKPDYTDFPS 3
           V  NG        GV  G++  Q W S   EAY P+ +  W KPDY++  S
Sbjct: 60  VEANGA------YGVRKGSN--QGWNS---EAYFPESTTDWFKPDYSELNS 99


>gb|AFK35294.1| unknown [Medicago truncatula]
          Length = 135

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/106 (54%), Positives = 64/106 (60%)
 Frame = -2

Query: 344 SSYTMLGVNNNHVMVXXXXXXXXXXXXXKVTYISSPMKVKTSASNFRALVQELTGKYSNV 165
           S   MLGVNN HVM              KVTYISSPMKVKTSASNFRALVQELTG+ SNV
Sbjct: 4   SEINMLGVNN-HVM-KGKKQSKKNKKEVKVTYISSPMKVKTSASNFRALVQELTGQDSNV 61

Query: 164 AEMFVGVNGGAHHHDHIGVHNGTSTQQYWGSNSGEAYLPDESAWMK 27
           A+MFV VN   H  D       +  Q    +NS E ++PD S WMK
Sbjct: 62  ADMFVEVNDFVHVDDVQNQQKNSIEQWSSDNNSSEGFMPDYSTWMK 107


>ref|XP_003598460.1| Sigma factor binding protein [Medicago truncatula]
           gi|355487508|gb|AES68711.1| Sigma factor binding protein
           [Medicago truncatula]
          Length = 128

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/102 (55%), Positives = 63/102 (61%)
 Frame = -2

Query: 332 MLGVNNNHVMVXXXXXXXXXXXXXKVTYISSPMKVKTSASNFRALVQELTGKYSNVAEMF 153
           MLGVNN HVM              KVTYISSPMKVKTSASNFRALVQELTG+ SNVA+MF
Sbjct: 1   MLGVNN-HVM-KGKKQSKKNKKEVKVTYISSPMKVKTSASNFRALVQELTGQDSNVADMF 58

Query: 152 VGVNGGAHHHDHIGVHNGTSTQQYWGSNSGEAYLPDESAWMK 27
           V VN   H  D       +  Q    +NS E ++PD S WMK
Sbjct: 59  VEVNDFVHVDDVQNQQKNSIEQWSSDNNSSEGFMPDYSTWMK 100


>ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783939 [Glycine max]
          Length = 122

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
 Frame = -2

Query: 257 VTYISSPMKVKTSASNFRALVQELTGKYSNVAEMFVGVNGGAHHHD--HIGVHNGTSTQQ 84
           VTYISSP+KVKTSASNFRALVQELTG+YSNVAE  + +     H +  H   H+  S  Q
Sbjct: 17  VTYISSPVKVKTSASNFRALVQELTGQYSNVAETSIPMEEDNGHSERVHRTHHHHESETQ 76

Query: 83  YWGSNSGEAYLPDESAWMKP-DYTDFPS 3
            W  N  E      +  MKP +Y++F S
Sbjct: 77  QWRVNVDEG-----TNLMKPHEYSEFLS 99


>ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago truncatula]
           gi|355521945|gb|AET02399.1| hypothetical protein
           MTR_8g040080 [Medicago truncatula]
          Length = 118

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/85 (48%), Positives = 54/85 (63%)
 Frame = -2

Query: 257 VTYISSPMKVKTSASNFRALVQELTGKYSNVAEMFVGVNGGAHHHDHIGVHNGTSTQQYW 78
           VTYISSP+KVKT+ASNFRALVQELTG+ SNVAE         +  D        ST Q W
Sbjct: 16  VTYISSPVKVKTNASNFRALVQELTGQDSNVAETTTMPLQEKYCDDERVNKGAYSTHQQW 75

Query: 77  GSNSGEAYLPDESAWMKPDYTDFPS 3
             +    ++P ++ ++KPDY++F S
Sbjct: 76  RVD----HVPHQNTFLKPDYSEFLS 96


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