BLASTX nr result

ID: Glycyrrhiza23_contig00029373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029373
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   124   8e-27
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   121   5e-26
ref|XP_003614107.1| F-box family protein [Medicago truncatula] g...   115   4e-24
ref|XP_003614104.1| F-box family protein [Medicago truncatula] g...   115   4e-24
ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatul...   112   4e-23

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +3

Query: 3   VLLHVLSFLNAKYAVRTCVLSTRWKHLWKRIPTLILRSSDFSTLKTFDKFVSTILSLRDG 182
           V+LH+LSFLNAK AVRTC+LS RWK++WK +PTL+L SSDFST K F KFVS ILS RDG
Sbjct: 38  VILHILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLHSSDFSTFKNFTKFVSKILSHRDG 97

Query: 183 SIALQGLDFHRNGSLQPHLLK 245
           +IALQ LDF R GS++PHLLK
Sbjct: 98  TIALQELDFERVGSIEPHLLK 118


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine
           max]
          Length = 384

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/81 (72%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   VLLHVLSFLNAKYAVRTCVLSTRWKHLWKRIPTLILRSSDFSTLKTFDKFVSTILSLRDG 182
           VLLH+L+FLNAK+AVRTCVLSTRWK LWKR+PTLIL SSDF T K F KFVS +LSLRD 
Sbjct: 25  VLLHILTFLNAKHAVRTCVLSTRWKDLWKRLPTLILHSSDFWTFKGFTKFVSRLLSLRDA 84

Query: 183 SIALQGLDFHRNGSLQPHLLK 245
           S+AL  LDF R+G ++P LLK
Sbjct: 85  SLALLKLDFERHGCIEPQLLK 105


>ref|XP_003614107.1| F-box family protein [Medicago truncatula]
           gi|355515442|gb|AES97065.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   VLLHVLSFLNAKYAVRTCVLSTRWKHLWKRIPTLILRSSDFSTLKTFDKFVSTILSLRDG 182
           +LLH+LSFL+AKYAV+TCVLSTRW++LWK IPTLIL SS FSTLK F KFV  IL+LRD 
Sbjct: 39  ILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLILHSSKFSTLKQFSKFVPKILTLRDT 98

Query: 183 SIALQGLDFHRNGSLQPHLLK 245
           SI+L  LD  R+G ++P +LK
Sbjct: 99  SISLHALDLDRHGHIEPRILK 119


>ref|XP_003614104.1| F-box family protein [Medicago truncatula]
           gi|355515439|gb|AES97062.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   VLLHVLSFLNAKYAVRTCVLSTRWKHLWKRIPTLILRSSDFSTLKTFDKFVSTILSLRDG 182
           +LLH+LSFL+AKYAV+TCVLSTRW++LWK IPTLIL SS FSTLK F KFV  IL+LRD 
Sbjct: 39  ILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLILHSSKFSTLKQFSKFVPKILTLRDT 98

Query: 183 SIALQGLDFHRNGSLQPHLLK 245
           SI+L  LD  R+G ++P +LK
Sbjct: 99  SISLHALDLDRHGHIEPRILK 119


>ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509361|gb|AES90503.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 600

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/81 (65%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   VLLHVLSFLNAKYAVRTCVLSTRWKHLWKRIPTLILRSSDFSTLKTFDKFVSTILSLRDG 182
           V+LH+LSFL++K+AV+TCVLSTRWKHLW RIPTLIL SS+FST+K F  FVS IL+LR+ 
Sbjct: 25  VILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIFVSNILTLRNS 84

Query: 183 SIALQGLDFHRNGSLQPHLLK 245
           S +LQ L+  R G ++P LLK
Sbjct: 85  STSLQALNLDRRGDIEPQLLK 105


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