BLASTX nr result

ID: Glycyrrhiza23_contig00029336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029336
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    76   2e-12
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    76   2e-12
ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811...    76   2e-12
gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    75   4e-12
gb|AFK45241.1| unknown [Lotus japonicus]                               71   8e-11

>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -1

Query: 300 WACPDPGWSKLNCDGAVAEFGDKAGCGGVLRSDMGTFIMGFAASLNLC-SVTEAELWAIL 124
           W  P  G+ KLNCDGA   +G+K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 30  WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 89

Query: 123 RSLKLAKEAGHIKIQVETDSLAALRLI 43
             ++     G+  + VE+DSL A+++I
Sbjct: 90  IGMQTVVARGYRNLIVESDSLKAIQII 116


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -1

Query: 300 WACPDPGWSKLNCDGAVAEFGDKAGCGGVLRSDMGTFIMGFAASLNLC-SVTEAELWAIL 124
           W  P  G+ KLNCDGA   +G+K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 123 RSLKLAKEAGHIKIQVETDSLAALRLI 43
             ++     G+  + VE+DSL A+++I
Sbjct: 188 IGMQTVVARGYRNLIVESDSLKAIQII 214


>ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
          Length = 445

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -1

Query: 300 WACPDPGWSKLNCDGAVAEFGDKAGCGGVLRSDMGTFIMGFAASLNLC-SVTEAELWAIL 124
           W  P  G+ KLNCDGA   +G+K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 123 RSLKLAKEAGHIKIQVETDSLAALRLI 43
             ++     G+  + VE+DSL A+++I
Sbjct: 188 IGMQTVVARGYRNLIVESDSLKAIQII 214


>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = -1

Query: 300 WACPDPGWSKLNCDGAVAEFGDKAGCGGVLRSDMGTFIMGFAASLNLCSVTEAELWAILR 121
           W  P  GW KLNCDGA    G+ AGCGG+LR   GT+I GF+  +  C    AE+W +  
Sbjct: 202 WKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSRKIGACDALHAEMWGLYL 261

Query: 120 SLKLAKEAGHIKIQVETDSLAALRLI 43
            L +A   G   + VE+DS   + ++
Sbjct: 262 GLDMAWREGISHLIVESDSKVLIDMV 287


>gb|AFK45241.1| unknown [Lotus japonicus]
          Length = 165

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
 Frame = -1

Query: 300 WACPDPGWSKLNCDGAVAEFGDKAGCGGVLRSDMGTFIMGFAASLNLCSVTEAELWAILR 121
           W      W KLN DG+ +   D A CGGV R   G F++GF   + +CS+  AELW ++ 
Sbjct: 29  WTPTLESWVKLNTDGSYSVDEDCAACGGVPRDHHGNFLLGFTMKVGVCSILHAELWGLVH 88

Query: 120 SLKLAKEAGHIKIQVETDSLAALRLIQM------DCFPL*R 16
            L+     G  KI +E DS   +  +         CFPL R
Sbjct: 89  GLRFVLGRGFSKILIEADSAGTIEFLNKGCPVVHPCFPLVR 129


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