BLASTX nr result

ID: Glycyrrhiza23_contig00029320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029320
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447811.1| hypothetical protein SORBIDRAFT_06g016240 [S...    60   1e-07
ref|XP_002522901.1| conserved hypothetical protein [Ricinus comm...    55   6e-06
ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [S...    54   1e-05

>ref|XP_002447811.1| hypothetical protein SORBIDRAFT_06g016240 [Sorghum bicolor]
           gi|241938994|gb|EES12139.1| hypothetical protein
           SORBIDRAFT_06g016240 [Sorghum bicolor]
          Length = 342

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
 Frame = +2

Query: 14  GWLEQLCEVFKDQKNYLKYILNIIFCNLWVIWKNRNKAVFEQIKPNPITTSIQAQALITD 193
           GWL  +    K +       L  +   LW IW  + +AV+E    +P++T    ++ ++D
Sbjct: 106 GWLHTIITTLKHED------LTRVLVTLWAIWYAKRQAVYENSFQSPLSTHCFVKSFMSD 159

Query: 194 TQKQQEAHSKPTSRGVQFV--CGWRPPREGIMKINTDAAFSTSSKIGYVSIIGRDEKGL 364
            +  ++A     S   Q      W PP  G+MKIN DAA S +S     S + RD  G+
Sbjct: 160 LELVKQAAPPGASHQHQNAQKAPWIPPPAGVMKINVDAAISKNSSKASASAVARDSSGM 218


>ref|XP_002522901.1| conserved hypothetical protein [Ricinus communis]
           gi|223537886|gb|EEF39501.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 382

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
 Frame = +2

Query: 98  WVIWKNRNKAVFEQIKPNPITTSIQAQALITDTQKQQEAHSKPTSR---GVQFVCGWRPP 268
           W IWK RN AVF  + P+P  T  + QA   +       +S+  S    G Q    W+ P
Sbjct: 201 WFIWKARNSAVFNGVMPDPPDTWKKYQAFSFECDSLSSHNSRLLSEPPSGGQEAMRWQCP 260

Query: 269 REGIMKINTDAAFSTSSKIGYVSIIGRDEK 358
             G +K N+D A++T+S++  + +I RD +
Sbjct: 261 ALGTIKYNSDMAWNTNSQLACLGVIARDSR 290


>ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor]
           gi|241934143|gb|EES07288.1| hypothetical protein
           SORBIDRAFT_04g028480 [Sorghum bicolor]
          Length = 316

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
 Frame = +2

Query: 41  FKDQKNYLKYIL-NI-------IFCNLWVIWKNRNKAVFEQIKPNPITTSIQAQALI--- 187
           F D K+++ YI  NI       I    W IW  R KA+ ++I  +P++  +    LI   
Sbjct: 110 FSDPKHWISYICCNIPKADGVRILVTCWAIWYARRKAIHDRIFQSPLSIMMMTNRLIEEF 169

Query: 188 -----TDTQKQQEAHSKPTSRGVQFVCGWRPPREGIMKINTDAAFSTSSKIGYVSIIGRD 352
                TD +++    +K T   +        P+ GI KINTDAA   S   G V+++ R 
Sbjct: 170 EFIQETDFKEKDHYQNKSTQNLIS-------PQNGISKINTDAAIDRSGTKGVVAVVCRT 222

Query: 353 EKG 361
           ++G
Sbjct: 223 DQG 225


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