BLASTX nr result

ID: Glycyrrhiza23_contig00029307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029307
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   288   4e-76
ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...   281   3e-74
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   251   3e-65
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              251   3e-65
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-62

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  288 bits (736), Expect = 4e-76
 Identities = 141/152 (92%), Positives = 148/152 (97%)
 Frame = -2

Query: 458 DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNAKRCQLKN 279
           DDQSI+SFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNN+KRCQLKN
Sbjct: 481 DDQSIYSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNSKRCQLKN 540

Query: 278 VLTDNSSGSKIVMKECHNEDAQCAFVVDKILEISSNHSSTNWSYGNIAVLYRRQISGKAF 99
           VLTDNSSGSKIVMKECHNEDAQCAFVVDKI+EISSN+S+ N  YGNIA+LYRRQISGKAF
Sbjct: 541 VLTDNSSGSKIVMKECHNEDAQCAFVVDKIIEISSNYSAANCCYGNIAILYRRQISGKAF 600

Query: 98  QMAFRDRKIPFNTHGVAFYRKKVVRTIIAMLR 3
           QMAFRDRKIPFN HGVAFYRKKVVRTI+AMLR
Sbjct: 601 QMAFRDRKIPFNIHGVAFYRKKVVRTIMAMLR 632


>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
            gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
            pcrA [Medicago truncatula]
          Length = 906

 Score =  281 bits (720), Expect = 3e-74
 Identities = 137/152 (90%), Positives = 147/152 (96%)
 Frame = -2

Query: 458  DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNAKRCQLKN 279
            DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTR IVEAA+SLIQNNAKRCQLKN
Sbjct: 616  DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRYIVEAAASLIQNNAKRCQLKN 675

Query: 278  VLTDNSSGSKIVMKECHNEDAQCAFVVDKILEISSNHSSTNWSYGNIAVLYRRQISGKAF 99
            VLTDNSSGSKI+MKECHNEDAQCAF+VDKI EISSNHS+ N SYGNIA+LYRR++SGKAF
Sbjct: 676  VLTDNSSGSKIIMKECHNEDAQCAFIVDKISEISSNHSADNCSYGNIAILYRRRVSGKAF 735

Query: 98   QMAFRDRKIPFNTHGVAFYRKKVVRTIIAMLR 3
            QMAFRDRKIPFN HGVAFYRKKVV+TII+ML+
Sbjct: 736  QMAFRDRKIPFNIHGVAFYRKKVVKTIISMLQ 767


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  251 bits (642), Expect = 3e-65
 Identities = 119/152 (78%), Positives = 138/152 (90%)
 Frame = -2

Query: 458 DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNAKRCQLKN 279
           +DQSIFSFNGAD+SGF SFR DFPN+KEIRLNKNYRSTRCI+EAASSLIQNN KRCQ K 
Sbjct: 472 EDQSIFSFNGADVSGFNSFRKDFPNHKEIRLNKNYRSTRCILEAASSLIQNNMKRCQSKK 531

Query: 278 VLTDNSSGSKIVMKECHNEDAQCAFVVDKILEISSNHSSTNWSYGNIAVLYRRQISGKAF 99
           VLTDNS+GS++ +KECH+E+AQCAFVVDKILEI+S+ S   +S+G++A+LYRRQ+SGK F
Sbjct: 532 VLTDNSTGSRVTIKECHSEEAQCAFVVDKILEITSDDSVAKYSFGSVAILYRRQVSGKVF 591

Query: 98  QMAFRDRKIPFNTHGVAFYRKKVVRTIIAMLR 3
           Q AFRDRKIPFN HGVAFYRKKVVR I+AMLR
Sbjct: 592 QTAFRDRKIPFNIHGVAFYRKKVVRAIVAMLR 623


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  251 bits (642), Expect = 3e-65
 Identities = 119/152 (78%), Positives = 138/152 (90%)
 Frame = -2

Query: 458 DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNAKRCQLKN 279
           +DQSIFSFNGAD+SGF SFR DFPN+KEIRLNKNYRSTRCI+EAASSLIQNN KRCQ K 
Sbjct: 270 EDQSIFSFNGADVSGFNSFRKDFPNHKEIRLNKNYRSTRCILEAASSLIQNNMKRCQSKK 329

Query: 278 VLTDNSSGSKIVMKECHNEDAQCAFVVDKILEISSNHSSTNWSYGNIAVLYRRQISGKAF 99
           VLTDNS+GS++ +KECH+E+AQCAFVVDKILEI+S+ S   +S+G++A+LYRRQ+SGK F
Sbjct: 330 VLTDNSTGSRVTIKECHSEEAQCAFVVDKILEITSDDSVAKYSFGSVAILYRRQVSGKVF 389

Query: 98  QMAFRDRKIPFNTHGVAFYRKKVVRTIIAMLR 3
           Q AFRDRKIPFN HGVAFYRKKVVR I+AMLR
Sbjct: 390 QTAFRDRKIPFNIHGVAFYRKKVVRAIVAMLR 421


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/152 (79%), Positives = 135/152 (88%)
 Frame = -2

Query: 458 DDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNAKRCQLKN 279
           DDQSIFSFNGA+ISGF SFR+DF NYKEIRLNKNYRSTR IVEAASSLIQNN KRCQ K+
Sbjct: 416 DDQSIFSFNGAEISGFDSFRHDFANYKEIRLNKNYRSTRYIVEAASSLIQNNMKRCQFKD 475

Query: 278 VLTDNSSGSKIVMKECHNEDAQCAFVVDKILEISSNHSSTNWSYGNIAVLYRRQISGKAF 99
           VLTDNS GSKI +KEC NE A+CAFVVDKILE +S+ S +  SYG+IA+LYRRQ+SGK F
Sbjct: 476 VLTDNSCGSKIAIKECQNERAECAFVVDKILEAASDGSHSKPSYGSIAILYRRQVSGKIF 535

Query: 98  QMAFRDRKIPFNTHGVAFYRKKVVRTIIAMLR 3
           Q+AFR+RKIPFN HGVAFYRKKVV+ IIAMLR
Sbjct: 536 QLAFRERKIPFNVHGVAFYRKKVVKAIIAMLR 567


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