BLASTX nr result

ID: Glycyrrhiza23_contig00029306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029306
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...    79   6e-30
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...    80   2e-29
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...    72   2e-25
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...    72   3e-25
emb|CBI38559.3| unnamed protein product [Vitis vinifera]               72   3e-25

>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 906

 Score = 78.6 bits (192), Expect(2) = 6e-30
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   AEYREMGNEIGAEILENYSNILKSCNALDYHDLISCSVKLL 123
           AEYR+MGN+IGAEILENYSNILKSCNA+DYHDLIS SVKLL
Sbjct: 528 AEYRDMGNQIGAEILENYSNILKSCNAVDYHDLISYSVKLL 568



 Score = 77.4 bits (189), Expect(2) = 6e-30
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 126 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLSILASHHRIT 245
           PEVFRESQDSWKAVVIDEFQDTSAMQYKLL ILASH++IT
Sbjct: 572 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLRILASHNKIT 611


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score = 79.7 bits (195), Expect(2) = 2e-29
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   AEYREMGNEIGAEILENYSNILKSCNALDYHDLISCSVKLL 123
           AEYR+MGNEIGA IL+NY+NILKSCNALDYHDLISCSVKLL
Sbjct: 393 AEYRKMGNEIGAAILKNYNNILKSCNALDYHDLISCSVKLL 433



 Score = 74.3 bits (181), Expect(2) = 2e-29
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +3

Query: 126 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLSILASHHRIT 245
           PEVF+E QDSWKA+VIDEFQDTSAMQYK L +LASHH+IT
Sbjct: 437 PEVFKECQDSWKAIVIDEFQDTSAMQYKFLKMLASHHKIT 476


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
           gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
           pcrA, putative [Ricinus communis]
          Length = 1089

 Score = 72.4 bits (176), Expect(2) = 2e-25
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 1   AEYREMGNEIGAEILENYSNILKSCNALDYHDLISCSVKLL 123
           A+Y++MG+EIGA IL NY++ILKSCNALDYHDLISCSVKLL
Sbjct: 361 ADYQKMGDEIGASILGNYNDILKSCNALDYHDLISCSVKLL 401



 Score = 68.2 bits (165), Expect(2) = 2e-25
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +3

Query: 126 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLSILASHHRIT 245
           P+VF+E QDSWKA+V+DEFQDTS MQY+LL +LASH+ IT
Sbjct: 405 PDVFKECQDSWKAIVVDEFQDTSGMQYRLLRLLASHNHIT 444


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score = 72.0 bits (175), Expect(2) = 3e-25
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = +3

Query: 126 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLSILASHHRIT 245
           PEVFRE Q+SWKAVVIDEFQDTSAMQY LL ILASH+RIT
Sbjct: 428 PEVFRECQESWKAVVIDEFQDTSAMQYCLLRILASHNRIT 467



 Score = 68.2 bits (165), Expect(2) = 3e-25
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = +1

Query: 4   EYREMGNEIGAEILENYSNILKSCNALDYHDLISCSVKLL 123
           E R MG+EIGA IL NYS IL++CNALDYHDLISCSVKLL
Sbjct: 385 ECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLL 424


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score = 72.0 bits (175), Expect(2) = 3e-25
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = +3

Query: 126 PEVFRESQDSWKAVVIDEFQDTSAMQYKLLSILASHHRIT 245
           PEVFRE Q+SWKAVVIDEFQDTSAMQY LL ILASH+RIT
Sbjct: 226 PEVFRECQESWKAVVIDEFQDTSAMQYCLLRILASHNRIT 265



 Score = 68.2 bits (165), Expect(2) = 3e-25
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = +1

Query: 4   EYREMGNEIGAEILENYSNILKSCNALDYHDLISCSVKLL 123
           E R MG+EIGA IL NYS IL++CNALDYHDLISCSVKLL
Sbjct: 183 ECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLL 222


Top