BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029288
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   437   e-121
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   429   e-118
ref|NP_199979.2| cleavage and polyadenylation specificity factor...   393   e-107
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...   393   e-107
gb|AAN41460.1| putative cleavage and polyadenylation specificity...   393   e-107

>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  437 bits (1125), Expect = e-121
 Identities = 220/233 (94%), Positives = 225/233 (96%)
 Frame = -2

Query: 701  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVDLPEFSGCKGIWTVYHKSNRSLNADSSKL 522
            NYELVCCSGHGKNGSLCVLRQSIRPEVITEV+LP   GCKGIWTVYHKS RS NADSSK+
Sbjct: 535  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVELP---GCKGIWTVYHKSTRSHNADSSKM 591

Query: 521  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 342
            ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE
Sbjct: 592  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 651

Query: 341  RGARILDGSFMTQDISFGASNSESNHGSESALALSVSIADPYVLLRMSDGSIRLLIGDPS 162
            RGARILDGSFMTQD+SFGASNSES   SESA+ALSVSIADP+VLLRMSDGSIRLLIGDPS
Sbjct: 652  RGARILDGSFMTQDVSFGASNSESGSASESAIALSVSIADPFVLLRMSDGSIRLLIGDPS 711

Query: 161  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDG 3
            TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDG
Sbjct: 712  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDG 764


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  429 bits (1104), Expect = e-118
 Identities = 216/233 (92%), Positives = 222/233 (95%)
 Frame = -2

Query: 701  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVDLPEFSGCKGIWTVYHKSNRSLNADSSKL 522
            NYELVCCSGHGKNGSLCVLRQSIRPEVITEV+LP   GCKGIWTVYHKS RS NADSSK+
Sbjct: 533  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVELP---GCKGIWTVYHKSTRSHNADSSKM 589

Query: 521  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 342
            ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGR RVIQVYE
Sbjct: 590  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYE 649

Query: 341  RGARILDGSFMTQDISFGASNSESNHGSESALALSVSIADPYVLLRMSDGSIRLLIGDPS 162
            RGARILDGSFMTQD+SFGASN ES   S+SA+ALSVSIADP+VLLRMSDGSIRLLIGDPS
Sbjct: 650  RGARILDGSFMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRMSDGSIRLLIGDPS 709

Query: 161  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDG 3
            TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGE IDG
Sbjct: 710  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGETIDG 762


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
            gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 1; AltName: Full=Cleavage and polyadenylation
            specificity factor 160 kDa subunit; Short=AtCPSF160;
            Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
            cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
          Length = 1442

 Score =  393 bits (1009), Expect = e-107
 Identities = 190/232 (81%), Positives = 213/232 (91%)
 Frame = -2

Query: 701  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVDLPEFSGCKGIWTVYHKSNRSLNADSSKL 522
            NYELVCCSGHGKNG+LCVLRQSIRPE+ITEV+LP   GCKGIWTVYHKS+R  NADSSK+
Sbjct: 540  NYELVCCSGHGKNGALCVLRQSIRPEMITEVELP---GCKGIWTVYHKSSRGHNADSSKM 596

Query: 521  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 342
            A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQV+E
Sbjct: 597  AADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFE 656

Query: 341  RGARILDGSFMTQDISFGASNSESNHGSESALALSVSIADPYVLLRMSDGSIRLLIGDPS 162
             GARILDGSFM Q++SFGASNSESN GSES+   SVSIADPYVLLRM+D SIRLL+GDPS
Sbjct: 657  HGARILDGSFMNQELSFGASNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPS 716

Query: 161  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAID 6
            TCT+S++SP+  E SK  +S+CTLYHDKGPEPWLRK STDAWLS+GVGEA+D
Sbjct: 717  TCTVSISSPSVLEGSKRKISACTLYHDKGPEPWLRKASTDAWLSSGVGEAVD 768


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit [Arabidopsis
            thaliana]
          Length = 1448

 Score =  393 bits (1009), Expect = e-107
 Identities = 190/232 (81%), Positives = 213/232 (91%)
 Frame = -2

Query: 701  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVDLPEFSGCKGIWTVYHKSNRSLNADSSKL 522
            NYELVCCSGHGKNG+LCVLRQSIRPE+ITEV+LP   GCKGIWTVYHKS+R  NADSSK+
Sbjct: 546  NYELVCCSGHGKNGALCVLRQSIRPEMITEVELP---GCKGIWTVYHKSSRGHNADSSKM 602

Query: 521  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 342
            A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQV+E
Sbjct: 603  AADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFE 662

Query: 341  RGARILDGSFMTQDISFGASNSESNHGSESALALSVSIADPYVLLRMSDGSIRLLIGDPS 162
             GARILDGSFM Q++SFGASNSESN GSES+   SVSIADPYVLLRM+D SIRLL+GDPS
Sbjct: 663  HGARILDGSFMNQELSFGASNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPS 722

Query: 161  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAID 6
            TCT+S++SP+  E SK  +S+CTLYHDKGPEPWLRK STDAWLS+GVGEA+D
Sbjct: 723  TCTVSISSPSVLEGSKRKISACTLYHDKGPEPWLRKASTDAWLSSGVGEAVD 774


>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
            subunit [Arabidopsis thaliana]
          Length = 1442

 Score =  393 bits (1009), Expect = e-107
 Identities = 190/232 (81%), Positives = 213/232 (91%)
 Frame = -2

Query: 701  NYELVCCSGHGKNGSLCVLRQSIRPEVITEVDLPEFSGCKGIWTVYHKSNRSLNADSSKL 522
            NYELVCCSGHGKNG+LCVLRQSIRPE+ITEV+LP   GCKGIWTVYHKS+R  NADSSK+
Sbjct: 540  NYELVCCSGHGKNGALCVLRQSIRPEMITEVELP---GCKGIWTVYHKSSRGHNADSSKM 596

Query: 521  ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYE 342
            A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQV+E
Sbjct: 597  AADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFE 656

Query: 341  RGARILDGSFMTQDISFGASNSESNHGSESALALSVSIADPYVLLRMSDGSIRLLIGDPS 162
             GARILDGSFM Q++SFGASNSESN GSES+   SVSIADPYVLLRM+D SIRLL+GDPS
Sbjct: 657  HGARILDGSFMNQELSFGASNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPS 716

Query: 161  TCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAID 6
            TCT+S++SP+  E SK  +S+CTLYHDKGPEPWLRK STDAWLS+GVGEA+D
Sbjct: 717  TCTVSISSPSVLEGSKRKISACTLYHDKGPEPWLRKASTDAWLSSGVGEAVD 768