BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029285
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   224   7e-57
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   222   3e-56
ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   186   1e-45
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   168   4e-40
ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39

>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  224 bits (570), Expect = 7e-57
 Identities = 112/127 (88%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
 Frame = -3

Query: 379 PAHMVVHPAPGNASGTLVNGILHHCNLPNVEF-KEDALSDTEDSDDEFNSFCSQGSSCEG 203
           PAHMVVHPAPGN SGTLVNGILHHCNLPNVEF KE+ALSDTEDSDDE N F SQ SS  G
Sbjct: 176 PAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTEDSDDELNGFSSQSSSSVG 235

Query: 202 LHSRLSVASIRPGIVHRLDKGTSGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPS 23
           L SRLS+ASIRPGIVHRLDKGTSGLLVVAKNEHSH+KLSEQFKLRTIKRVYVSLTAGVP+
Sbjct: 236 LDSRLSMASIRPGIVHRLDKGTSGLLVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPT 295

Query: 22  PIAGRVE 2
           P++GRVE
Sbjct: 296 PVSGRVE 302


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  222 bits (565), Expect = 3e-56
 Identities = 112/129 (86%), Positives = 121/129 (93%), Gaps = 3/129 (2%)
 Frame = -3

Query: 379 PAHMVVHPAPGNASGTLVNGILHHCNLPNVEF-KEDALSDTEDSDDEFNSFCSQGSSCEG 203
           PAHMVVHPAPGN SGTLVNGILHHCNLPNVEF K++ALSDTEDSDDEFNS+ S  SSCEG
Sbjct: 163 PAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNSYISLASSCEG 222

Query: 202 LHSRLSVAS--IRPGIVHRLDKGTSGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGV 29
           L+SRLSVAS  IRPGIVHRLDKGTSGLLVVAK+EHSH+KLSEQFK RTIKR+YVSLTAGV
Sbjct: 223 LNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGV 282

Query: 28  PSPIAGRVE 2
           P+P+AGRVE
Sbjct: 283 PTPVAGRVE 291


>ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Glycine max]
          Length = 441

 Score =  186 bits (473), Expect = 1e-45
 Identities = 100/130 (76%), Positives = 111/130 (85%), Gaps = 4/130 (3%)
 Frame = -3

Query: 379 PAHMVVHPAPGNASGTLVNGILHHCNLPNVEF--KEDALSDTEDSDDEFNSFCSQGSSCE 206
           PAHMV+   P N SG LVNGILHHCNLPNVEF  +E+ALSDTEDSDDEFNS+ S  S CE
Sbjct: 157 PAHMVI---PNNTSGMLVNGILHHCNLPNVEFSKEEEALSDTEDSDDEFNSYRSLASFCE 213

Query: 205 GLHSRLSVAS--IRPGIVHRLDKGTSGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAG 32
           GL+SRLSVAS  IR GIVHRLDKGTSGL  VAK+EHSH+KLSEQFK  TIKR+YVSLTAG
Sbjct: 214 GLNSRLSVASNSIRSGIVHRLDKGTSGL-PVAKDEHSHMKLSEQFKQHTIKRIYVSLTAG 272

Query: 31  VPSPIAGRVE 2
           +P+P+AGRVE
Sbjct: 273 LPTPVAGRVE 282


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  168 bits (426), Expect = 4e-40
 Identities = 85/126 (67%), Positives = 99/126 (78%)
 Frame = -3

Query: 379 PAHMVVHPAPGNASGTLVNGILHHCNLPNVEFKEDALSDTEDSDDEFNSFCSQGSSCEGL 200
           PAHMVVHPAPGNASGTLVNGILHHC+LP V        + + SDDEFNSF + G +C   
Sbjct: 158 PAHMVVHPAPGNASGTLVNGILHHCSLPTVALPNRDSEEDDISDDEFNSFAA-GQNCGTC 216

Query: 199 HSRLSVASIRPGIVHRLDKGTSGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSP 20
            +     +IRPGIVHRLDKGTSGLLVVAK+EHSH  LSEQFKL +I RVY+SLT+GVP+P
Sbjct: 217 ET-----NIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTP 271

Query: 19  IAGRVE 2
           ++GRVE
Sbjct: 272 LSGRVE 277


>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  167 bits (422), Expect = 1e-39
 Identities = 87/126 (69%), Positives = 98/126 (77%)
 Frame = -3

Query: 379 PAHMVVHPAPGNASGTLVNGILHHCNLPNVEFKEDALSDTEDSDDEFNSFCSQGSSCEGL 200
           PAHMVVHPAPGNA+GTLVNGILHHC+LP V  +E  LS  ED  D+ +         EGL
Sbjct: 175 PAHMVVHPAPGNATGTLVNGILHHCSLPTVSSQE-VLSGAEDVSDDDD---------EGL 224

Query: 199 HSRLSVASIRPGIVHRLDKGTSGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSP 20
            S    AS+RPGIVHRLDKGTSGLLVVAK+EHSH  LSEQFKL TIKRVYVSLT GVP+P
Sbjct: 225 CSSSYAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAP 284

Query: 19  IAGRVE 2
           +AGR++
Sbjct: 285 MAGRID 290