BLASTX nr result

ID: Glycyrrhiza23_contig00029271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029271
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max]        148   4e-34
ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]        146   2e-33
ref|XP_002511279.1| Protein tipD, putative [Ricinus communis] gi...   135   4e-30
ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|NP_199834.2| transducin/WD40 domain-containing protein [Arab...   130   1e-28

>ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max]
          Length = 514

 Score =  148 bits (374), Expect = 4e-34
 Identities = 63/73 (86%), Positives = 71/73 (97%)
 Frame = -1

Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163
           RVASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+GKPL
Sbjct: 442 RVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIGKPL 501

Query: 162 ASADKNGVVCIWT 124
           ASADKNG+VC+WT
Sbjct: 502 ASADKNGIVCVWT 514


>ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]
          Length = 514

 Score =  146 bits (368), Expect = 2e-33
 Identities = 62/73 (84%), Positives = 70/73 (95%)
 Frame = -1

Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163
           RVASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+ KPL
Sbjct: 442 RVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIAKPL 501

Query: 162 ASADKNGVVCIWT 124
           ASADKNG+VC+WT
Sbjct: 502 ASADKNGIVCVWT 514


>ref|XP_002511279.1| Protein tipD, putative [Ricinus communis]
           gi|223550394|gb|EEF51881.1| Protein tipD, putative
           [Ricinus communis]
          Length = 520

 Score =  135 bits (340), Expect = 4e-30
 Identities = 57/73 (78%), Positives = 69/73 (94%)
 Frame = -1

Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163
           RVASNWSRSCISPDDN++AAGSADGS+++WS ++ DIVSTLKEHTSS+LCC+WSGLGKPL
Sbjct: 448 RVASNWSRSCISPDDNYVAAGSADGSVHIWSVAKADIVSTLKEHTSSVLCCSWSGLGKPL 507

Query: 162 ASADKNGVVCIWT 124
           A+ADKNG++  WT
Sbjct: 508 ATADKNGIIYTWT 520


>ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|222868648|gb|EEF05779.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  135 bits (339), Expect = 5e-30
 Identities = 57/73 (78%), Positives = 69/73 (94%)
 Frame = -1

Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163
           RVASNWSRSCISPDDN++AAGSADGS+++WS S+GDIVSTLKEHT+ +LCC+WSGLGKPL
Sbjct: 478 RVASNWSRSCISPDDNYVAAGSADGSVHIWSISQGDIVSTLKEHTAPVLCCSWSGLGKPL 537

Query: 162 ASADKNGVVCIWT 124
           AS+DKNG++  WT
Sbjct: 538 ASSDKNGIIYTWT 550


>ref|NP_199834.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|40823395|gb|AAR92280.1| At5g50230 [Arabidopsis
           thaliana] gi|56381931|gb|AAV85684.1| At5g50230
           [Arabidopsis thaliana] gi|332008531|gb|AED95914.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 509

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/73 (78%), Positives = 67/73 (91%)
 Frame = -1

Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163
           R+ASNWSRSCISPDD+++AAGSADGS++VWS S+G+IVS LKE TS ILCC+WSG+GKPL
Sbjct: 437 RLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPL 496

Query: 162 ASADKNGVVCIWT 124
           ASADKNG VC WT
Sbjct: 497 ASADKNGYVCTWT 509


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