BLASTX nr result
ID: Glycyrrhiza23_contig00029271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00029271 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max] 148 4e-34 ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max] 146 2e-33 ref|XP_002511279.1| Protein tipD, putative [Ricinus communis] gi... 135 4e-30 ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|2... 135 5e-30 ref|NP_199834.2| transducin/WD40 domain-containing protein [Arab... 130 1e-28 >ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max] Length = 514 Score = 148 bits (374), Expect = 4e-34 Identities = 63/73 (86%), Positives = 71/73 (97%) Frame = -1 Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163 RVASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+GKPL Sbjct: 442 RVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIGKPL 501 Query: 162 ASADKNGVVCIWT 124 ASADKNG+VC+WT Sbjct: 502 ASADKNGIVCVWT 514 >ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max] Length = 514 Score = 146 bits (368), Expect = 2e-33 Identities = 62/73 (84%), Positives = 70/73 (95%) Frame = -1 Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163 RVASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+ KPL Sbjct: 442 RVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIAKPL 501 Query: 162 ASADKNGVVCIWT 124 ASADKNG+VC+WT Sbjct: 502 ASADKNGIVCVWT 514 >ref|XP_002511279.1| Protein tipD, putative [Ricinus communis] gi|223550394|gb|EEF51881.1| Protein tipD, putative [Ricinus communis] Length = 520 Score = 135 bits (340), Expect = 4e-30 Identities = 57/73 (78%), Positives = 69/73 (94%) Frame = -1 Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163 RVASNWSRSCISPDDN++AAGSADGS+++WS ++ DIVSTLKEHTSS+LCC+WSGLGKPL Sbjct: 448 RVASNWSRSCISPDDNYVAAGSADGSVHIWSVAKADIVSTLKEHTSSVLCCSWSGLGKPL 507 Query: 162 ASADKNGVVCIWT 124 A+ADKNG++ WT Sbjct: 508 ATADKNGIIYTWT 520 >ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|222868648|gb|EEF05779.1| predicted protein [Populus trichocarpa] Length = 550 Score = 135 bits (339), Expect = 5e-30 Identities = 57/73 (78%), Positives = 69/73 (94%) Frame = -1 Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163 RVASNWSRSCISPDDN++AAGSADGS+++WS S+GDIVSTLKEHT+ +LCC+WSGLGKPL Sbjct: 478 RVASNWSRSCISPDDNYVAAGSADGSVHIWSISQGDIVSTLKEHTAPVLCCSWSGLGKPL 537 Query: 162 ASADKNGVVCIWT 124 AS+DKNG++ WT Sbjct: 538 ASSDKNGIIYTWT 550 >ref|NP_199834.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|40823395|gb|AAR92280.1| At5g50230 [Arabidopsis thaliana] gi|56381931|gb|AAV85684.1| At5g50230 [Arabidopsis thaliana] gi|332008531|gb|AED95914.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 509 Score = 130 bits (327), Expect = 1e-28 Identities = 57/73 (78%), Positives = 67/73 (91%) Frame = -1 Query: 342 RVASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPL 163 R+ASNWSRSCISPDD+++AAGSADGS++VWS S+G+IVS LKE TS ILCC+WSG+GKPL Sbjct: 437 RLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPL 496 Query: 162 ASADKNGVVCIWT 124 ASADKNG VC WT Sbjct: 497 ASADKNGYVCTWT 509