BLASTX nr result
ID: Glycyrrhiza23_contig00029254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00029254
(1671 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 903 0.0
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 903 0.0
ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M... 860 0.0
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 783 0.0
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 776 0.0
>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1162
Score = 903 bits (2334), Expect = 0.0
Identities = 462/556 (83%), Positives = 490/556 (88%), Gaps = 1/556 (0%)
Frame = -2
Query: 1667 VLGDLFAHYPPGDGNLLEMIGENSDSSRN-AKQNKDDIFGRPSMTXXXXXXXXXXXATRM 1491
VLGDLFAHYPPGDGN EM+GENSD++ + KQ DDIF RPSMT +RM
Sbjct: 113 VLGDLFAHYPPGDGNSWEMVGENSDTATDRTKQRPDDIFSRPSMTKAEIARRLEALTSRM 172
Query: 1490 KTVSNLKQITEQRSKLPIASFKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGK 1311
VSNLKQI E RSKLPI S+KD ITSTVESHQVV+ISGETGCGKTTQVPQFILD++WGK
Sbjct: 173 NNVSNLKQIIEGRSKLPIVSYKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGK 232
Query: 1310 GEVCKIVCTQPRRISAMSVSERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLL 1131
GEVCKIVCTQPRRISA SVSERI+SERGETIGENVGYKIRLES GGRQSSIVLCTTGVLL
Sbjct: 233 GEVCKIVCTQPRRISATSVSERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVLL 292
Query: 1130 RVLVSKGSHSSKRKPMKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 951
RVLVSKGSHSSK +KD+ISGITHIIMDEIHERDRYSDFMLAIIRDMLP YPHL LILM
Sbjct: 293 RVLVSKGSHSSKIGRVKDEISGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLCLILM 352
Query: 950 SATIDDVRFSQYFGSCPIINVPGFTYPVRTFYLEDVLSFVKSSNDNNLDSATFSIPINNH 771
SATID RFSQYFG CPII+VPGFTYPV+TFYLEDVLS VKS DN+LDS T SIP
Sbjct: 353 SATIDAARFSQYFGGCPIIHVPGFTYPVKTFYLEDVLSIVKSRPDNHLDSTTCSIPKTTC 412
Query: 770 ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRV 591
ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTP+LF+YQHSLTGLTPLMVFAG+GRV
Sbjct: 413 ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPDLFHYQHSLTGLTPLMVFAGKGRV 472
Query: 590 GDMCMLLSFGADCNLRAKDGTNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKY 411
GDMCMLLS GADC+LRAKDG ALEIAERENQPEAAEI+KKHM N+FSNS+EE+KLL+KY
Sbjct: 473 GDMCMLLSCGADCHLRAKDGMTALEIAERENQPEAAEILKKHMDNDFSNSIEEKKLLDKY 532
Query: 410 LETINPELVDVVLIEQLIRKICIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFM 231
L T+NPELVD VLIEQLIRKICIDS DGGILVFLPGWDDINR RERLLAS FFKNSSMFM
Sbjct: 533 LATVNPELVDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERLLASPFFKNSSMFM 592
Query: 230 VISLHSMVPTMEQKKVFKRPPHGCRKIVLSTNIAETAXXXXXXXXXXXTGRMKEKSYDPY 51
+ISLHSMVP+MEQKKVF+ PPHGCRKIVLSTNIAETA TGRMKEKSYDPY
Sbjct: 593 LISLHSMVPSMEQKKVFRHPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPY 652
Query: 50 NNVSTLQSSWISKASA 3
NNVSTLQSSWISKASA
Sbjct: 653 NNVSTLQSSWISKASA 668
>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1164
Score = 903 bits (2333), Expect = 0.0
Identities = 465/557 (83%), Positives = 492/557 (88%), Gaps = 2/557 (0%)
Frame = -2
Query: 1667 VLGDLFAHYPPGDGNLLEMIGENSDSSRN--AKQNKDDIFGRPSMTXXXXXXXXXXXATR 1494
VLGDLFAH+PPG+GNL EM+GENS+ + KQ DIF RPSMT A+R
Sbjct: 114 VLGDLFAHHPPGEGNLWEMVGENSEDTTTDGTKQRPGDIFSRPSMTKAEIARRLEALASR 173
Query: 1493 MKTVSNLKQITEQRSKLPIASFKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWG 1314
M VSNLKQI E RSKLPIASFKD ITSTVESHQVV+ISGETGCGKTTQVPQFILD++WG
Sbjct: 174 MNNVSNLKQINEGRSKLPIASFKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWG 233
Query: 1313 KGEVCKIVCTQPRRISAMSVSERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVL 1134
KGEVCKIVCTQPRRISA SVSERI+SERGETIGENVGYKIRLES GGRQSSIVLCTTGV+
Sbjct: 234 KGEVCKIVCTQPRRISATSVSERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVV 293
Query: 1133 LRVLVSKGSHSSKRKPMKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 954
LRVLVSKGSHSSK +KD+ISGITHIIMDEIHERDRYSDFMLAIIRDMLP YPHLRLIL
Sbjct: 294 LRVLVSKGSHSSKTGRVKDEISGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLRLIL 353
Query: 953 MSATIDDVRFSQYFGSCPIINVPGFTYPVRTFYLEDVLSFVKSSNDNNLDSATFSIPINN 774
MSATID RFSQYFG CPII+VPGFTYPV+TFYLEDVLS VKS +DN+LDS T SIP N
Sbjct: 354 MSATIDAARFSQYFGGCPIIHVPGFTYPVKTFYLEDVLSIVKSRHDNHLDSTTCSIPKNT 413
Query: 773 HELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGR 594
ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAG+GR
Sbjct: 414 CELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGKGR 473
Query: 593 VGDMCMLLSFGADCNLRAKDGTNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNK 414
VGDMCMLLS GAD LRAKDG ALEIAERENQPEAAEI+KKHM ++FSNSMEE+KLL+K
Sbjct: 474 VGDMCMLLSCGADFCLRAKDGMAALEIAERENQPEAAEILKKHMDSDFSNSMEEKKLLDK 533
Query: 413 YLETINPELVDVVLIEQLIRKICIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMF 234
YL T+NPELVD VLIEQLIRKICIDS DGGILVFLPGWDDINR RERLLASSFFKNSSMF
Sbjct: 534 YLATVNPELVDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERLLASSFFKNSSMF 593
Query: 233 MVISLHSMVPTMEQKKVFKRPPHGCRKIVLSTNIAETAXXXXXXXXXXXTGRMKEKSYDP 54
M+ISLHSMVP+MEQKKVF+RPPHGCRKIVLSTNIAETA TGRMKEKSYD
Sbjct: 594 MLISLHSMVPSMEQKKVFRRPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDA 653
Query: 53 YNNVSTLQSSWISKASA 3
YNNVSTLQSSWISKASA
Sbjct: 654 YNNVSTLQSSWISKASA 670
>ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase
A-like protein [Medicago truncatula]
Length = 1190
Score = 860 bits (2222), Expect = 0.0
Identities = 435/556 (78%), Positives = 473/556 (85%)
Frame = -2
Query: 1670 RVLGDLFAHYPPGDGNLLEMIGENSDSSRNAKQNKDDIFGRPSMTXXXXXXXXXXXATRM 1491
R +GDLFAH+PPGDGNL +M+GE S S NA+ DIF RP MT +R
Sbjct: 112 RAMGDLFAHFPPGDGNLKDMVGEKSGSMVNARHRHSDIFSRPIMTKDEITRKLEAVTSRR 171
Query: 1490 KTVSNLKQITEQRSKLPIASFKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGK 1311
+TVS+LK IT RSKLPIAS+KD ITS VESHQVV+ISGETGCGKTTQVPQ+ILDY+WGK
Sbjct: 172 ETVSDLKVITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGK 231
Query: 1310 GEVCKIVCTQPRRISAMSVSERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLL 1131
GE CKI+CTQPRRISAMSVSERIS ERGE GENVGYKIRL+S GG+QSSIVLCTTGVLL
Sbjct: 232 GETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLL 291
Query: 1130 RVLVSKGSHSSKRKPMKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 951
RVLVSKGS S + P KD+IS ITHIIMDEIHERDRYSDFMLAI+RDMLP YPHLRL+LM
Sbjct: 292 RVLVSKGSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLM 351
Query: 950 SATIDDVRFSQYFGSCPIINVPGFTYPVRTFYLEDVLSFVKSSNDNNLDSATFSIPINNH 771
SATID RFSQYFG CP+I VPGFTYPV+T+YLEDVLS VKSSND D +TFSIP NNH
Sbjct: 352 SATIDTARFSQYFGGCPVIQVPGFTYPVKTYYLEDVLSAVKSSND---DGSTFSIPTNNH 408
Query: 770 ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRV 591
+SEE KLS DEAINLAWSNDEWDLL ELVSSE TPELFNYQHSLTGLTPLMVFAG+GR+
Sbjct: 409 MISEEHKLSFDEAINLAWSNDEWDLLSELVSSEETPELFNYQHSLTGLTPLMVFAGKGRI 468
Query: 590 GDMCMLLSFGADCNLRAKDGTNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKY 411
G+MCMLLSFGADCNLR+KDGT ALEIAERENQPEAAEIIKKHM + S+S EE+ +LNKY
Sbjct: 469 GEMCMLLSFGADCNLRSKDGTTALEIAERENQPEAAEIIKKHM--DGSSSTEEQSILNKY 526
Query: 410 LETINPELVDVVLIEQLIRKICIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFM 231
LE + PE+VDVVLIEQLIRKIC DSKDGGILVF GWDDINRARE+LLASSFF N S F+
Sbjct: 527 LERVRPEIVDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFV 586
Query: 230 VISLHSMVPTMEQKKVFKRPPHGCRKIVLSTNIAETAXXXXXXXXXXXTGRMKEKSYDPY 51
VISLHSMVPT+EQKKVFKRPP GCRKIVLSTN+AETA TGRMKEKSYDPY
Sbjct: 587 VISLHSMVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPY 646
Query: 50 NNVSTLQSSWISKASA 3
NNVSTLQSSWISKASA
Sbjct: 647 NNVSTLQSSWISKASA 662
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 783 bits (2023), Expect = 0.0
Identities = 395/560 (70%), Positives = 461/560 (82%), Gaps = 5/560 (0%)
Frame = -2
Query: 1667 VLGDLFAHYPPGDGNLLEMIGEN-SDSSRNAKQNKDDIFGRPSMTXXXXXXXXXXXATRM 1491
VL DLF YPP D ++ + EN S + KDDIFGRPSM A+R+
Sbjct: 107 VLLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRI 166
Query: 1490 KTVSNLKQITEQRSKLPIASFKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGK 1311
+ +L+QITE RSKLPIASFKDVITST+ESHQVV+ISGETGCGKTTQVPQF+LDY+WGK
Sbjct: 167 EEDPHLRQITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGK 226
Query: 1310 GEVCKIVCTQPRRISAMSVSERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLL 1131
GE CKIVCTQPRRISA SV+ERIS E+GE +G++VGYKIRLES GGR SSI+ CT G+LL
Sbjct: 227 GEACKIVCTQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILL 286
Query: 1130 RVLVSKGSHSSK----RKPMKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLR 963
RVLVSKG+ K RK K DIS ITHII+DEIHERDRYSDFMLAI+RDML SYPHLR
Sbjct: 287 RVLVSKGTDRLKPEALRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLR 346
Query: 962 LILMSATIDDVRFSQYFGSCPIINVPGFTYPVRTFYLEDVLSFVKSSNDNNLDSATFSIP 783
LILMSATID RFSQYFG CPII VPGFTYPV+TFYLEDVLS +KS+ +NNLDS S+P
Sbjct: 347 LILMSATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLP 406
Query: 782 INNHELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAG 603
+ + +L E+ +++DEAINLAWSNDE+D LL+ VSSEGTP++FNYQHS TGLTPLMVFAG
Sbjct: 407 VEDPKLIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAG 466
Query: 602 RGRVGDMCMLLSFGADCNLRAKDGTNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKL 423
+GRV D+CM+LSFGADC+L+A D T AL++AEREN EAAE+IK+HM N SNS+EE++L
Sbjct: 467 KGRVADVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQL 526
Query: 422 LNKYLETINPELVDVVLIEQLIRKICIDSKDGGILVFLPGWDDINRARERLLASSFFKNS 243
L+KYL T NPE++DV L+EQL+RKIC DSKDG ILVFLPGWDDINR RE+LL++SFFK+S
Sbjct: 527 LDKYLATNNPEIIDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDS 586
Query: 242 SMFMVISLHSMVPTMEQKKVFKRPPHGCRKIVLSTNIAETAXXXXXXXXXXXTGRMKEKS 63
S F+VISLHSMVP++EQKKVFKRPP GCRKIVLSTNI+ETA +GRMKEKS
Sbjct: 587 SKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKS 646
Query: 62 YDPYNNVSTLQSSWISKASA 3
YDPYNNVSTLQS+WISKASA
Sbjct: 647 YDPYNNVSTLQSAWISKASA 666
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 776 bits (2005), Expect = 0.0
Identities = 391/556 (70%), Positives = 457/556 (82%), Gaps = 1/556 (0%)
Frame = -2
Query: 1667 VLGDLFAHYPPGDGNLLEMIGEN-SDSSRNAKQNKDDIFGRPSMTXXXXXXXXXXXATRM 1491
VL DLF YPP D ++ + EN S + KDDIFGRPSM A+R+
Sbjct: 107 VLLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRI 166
Query: 1490 KTVSNLKQITEQRSKLPIASFKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGK 1311
+ +L+QITE RSKLPIASFKDVITST+ESHQVV+ISGETGCGKTTQVPQF+LDY+WGK
Sbjct: 167 EEDPHLRQITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGK 226
Query: 1310 GEVCKIVCTQPRRISAMSVSERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLL 1131
GE CKIVCTQPRRISA SV+ERIS E+GE +G++VGYKIRLES GGR SSI+ CT G+LL
Sbjct: 227 GEACKIVCTQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILL 286
Query: 1130 RVLVSKGSHSSKRKPMKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 951
RVLVSKG+ DIS ITHII+DEIHERDRYSDFMLAI+RDML SYPHLRLILM
Sbjct: 287 RVLVSKGTDR--------DISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILM 338
Query: 950 SATIDDVRFSQYFGSCPIINVPGFTYPVRTFYLEDVLSFVKSSNDNNLDSATFSIPINNH 771
SATID RFSQYFG CPII VPGFTYPV+TFYLEDVLS +KS+ +NNLDS S+P+ +
Sbjct: 339 SATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDP 398
Query: 770 ELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRV 591
+L E+ +++DEAINLAWSNDE+D LL+ VSSEGTP++FNYQHS TGLTPLMVFAG+GRV
Sbjct: 399 KLIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRV 458
Query: 590 GDMCMLLSFGADCNLRAKDGTNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKY 411
D+CM+LSFGADC+L+A D T AL++AEREN EAAE+IK+HM N SNS+EE++LL+KY
Sbjct: 459 ADVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQLLDKY 518
Query: 410 LETINPELVDVVLIEQLIRKICIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFM 231
L T NPE++DV L+EQL+RKIC DSKDG ILVFLPGWDDINR RE+LL++SFFK+SS F+
Sbjct: 519 LATNNPEIIDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDSSKFV 578
Query: 230 VISLHSMVPTMEQKKVFKRPPHGCRKIVLSTNIAETAXXXXXXXXXXXTGRMKEKSYDPY 51
VISLHSMVP++EQKKVFKRPP GCRKIVLSTNI+ETA +GRMKEKSYDPY
Sbjct: 579 VISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKSYDPY 638
Query: 50 NNVSTLQSSWISKASA 3
NNVSTLQS+WISKASA
Sbjct: 639 NNVSTLQSAWISKASA 654