BLASTX nr result

ID: Glycyrrhiza23_contig00029189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029189
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   231   5e-59
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...   169   2e-40
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   165   3e-39
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   161   6e-38

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like
           [Glycine max]
          Length = 1707

 Score =  231 bits (589), Expect = 5e-59
 Identities = 125/177 (70%), Positives = 137/177 (77%)
 Frame = +3

Query: 3   VKEVDHQIRHEVSDWGKGKKILSNETDMAGCSSRCDNVIPRSDNQEKIDEMLAASIDAEQ 182
           VKEVD+Q +H+V+  GKGK IL  E DM GCSSR DNV  RSDNQ  IDEMLAASI  E+
Sbjct: 268 VKEVDNQNQHDVNYRGKGKGILLIEADMVGCSSRHDNVTSRSDNQHSIDEMLAASIAMEE 327

Query: 183 NEKLVNNVSTSLGDSANKXXXXXXXXXXXMILPDMHSEVDPAVLASLPPSMQLDLLVQMR 362
           NE+LVNN STS+G SA +           MILP MH ++DPAVLASLPPSMQLDLLVQMR
Sbjct: 328 NEELVNNTSTSVGASAIEEEEVDYDEDEEMILPAMHGKIDPAVLASLPPSMQLDLLVQMR 387

Query: 363 ERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREIDEVQKXXXXXXXXXIQTS 533
           ERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRR+IDEVQK         +QTS
Sbjct: 388 ERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRRDIDEVQKAAAVGGVGGVQTS 444


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
           gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
           protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score =  169 bits (429), Expect = 2e-40
 Identities = 94/161 (58%), Positives = 113/161 (70%)
 Frame = +3

Query: 51  KGKKILSNETDMAGCSSRCDNVIPRSDNQEKIDEMLAASIDAEQNEKLVNNVSTSLGDSA 230
           KGK++LS+ET + G  S   ++  RS +Q+ +DEMLAASI AE+   L    STS     
Sbjct: 203 KGKELLSDETHVVGSDSERMDLASRSAHQQNLDEMLAASIAAEEARSLNEKASTSA--VT 260

Query: 231 NKXXXXXXXXXXXMILPDMHSEVDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKK 410
           N             ILP+MH  VDP+VLA+LPPS+QLDLLVQMRERL+AENRQKYQ+VKK
Sbjct: 261 NLDGEDTDDEDEEFILPEMHGVVDPSVLAALPPSVQLDLLVQMRERLMAENRQKYQRVKK 320

Query: 411 DPAKFSELQIQAYLKTVAFRREIDEVQKXXXXXXXXXIQTS 533
           DPAKFSELQIQAYLKTVAFRR+ID+VQK         +QTS
Sbjct: 321 DPAKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQTS 361


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/161 (57%), Positives = 115/161 (71%)
 Frame = +3

Query: 51  KGKKILSNETDMAGCSSRCDNVIPRSDNQEKIDEMLAASIDAEQNEKLVNNVSTSLGDSA 230
           KGKK+LS +T+ AG  S  ++ +  + NQEK+DEMLAAS+ AE++   V +   S  +  
Sbjct: 136 KGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNEEDD 195

Query: 231 NKXXXXXXXXXXXMILPDMHSEVDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKK 410
           +            M+LP M+ +VDPAVLA+LPPSMQLDLLVQMRE+L+AENRQKYQKVKK
Sbjct: 196 DDDEDEE------MMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVKK 249

Query: 411 DPAKFSELQIQAYLKTVAFRREIDEVQKXXXXXXXXXIQTS 533
            PA+FSELQIQAYLKTVAFRREIDEVQK         +QTS
Sbjct: 250 APAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTS 290


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/161 (57%), Positives = 115/161 (71%)
 Frame = +3

Query: 51  KGKKILSNETDMAGCSSRCDNVIPRSDNQEKIDEMLAASIDAEQNEKLVNNVSTSLGDSA 230
           KGKK+LS +T+ AG  S  ++ +  + NQEK+DEMLAAS+ AE++   V +   S  +  
Sbjct: 136 KGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNEEDD 195

Query: 231 NKXXXXXXXXXXXMILPDMHSEVDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKK 410
           +            M+LP M+ +VDPAVLA+LPPSMQLDLLVQMRE+L+AENRQKYQKVKK
Sbjct: 196 DDDEDEE------MMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVKK 249

Query: 411 DPAKFSELQIQAYLKTVAFRREIDEVQKXXXXXXXXXIQTS 533
            PA+FSELQIQAYLKTVAFRREIDEVQK         +QTS
Sbjct: 250 APAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTS 290


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
           gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
           putative [Ricinus communis]
          Length = 1641

 Score =  161 bits (407), Expect = 6e-38
 Identities = 93/162 (57%), Positives = 110/162 (67%)
 Frame = +3

Query: 48  GKGKKILSNETDMAGCSSRCDNVIPRSDNQEKIDEMLAASIDAEQNEKLVNNVSTSLGDS 227
           G  K++L +  DM       D+V+  S NQEK+DEMLAASI AE++   +N  STS   +
Sbjct: 202 GNVKEVLIDLIDMERTDLERDDVVAESYNQEKLDEMLAASIAAEEDVISINTASTSA--A 259

Query: 228 ANKXXXXXXXXXXXMILPDMHSEVDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVK 407
           A             MILP++  +VDP VLA+LPPSMQLDLLVQMRERLIAENRQKYQKVK
Sbjct: 260 AIPSEEEGNDEVEEMILPEICGKVDPTVLAALPPSMQLDLLVQMRERLIAENRQKYQKVK 319

Query: 408 KDPAKFSELQIQAYLKTVAFRREIDEVQKXXXXXXXXXIQTS 533
           K P KFSELQI+AYLKTVAFRREID VQK         +Q+S
Sbjct: 320 KAPEKFSELQIEAYLKTVAFRREIDHVQKAAAGNGVGGVQSS 361


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