BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029175
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi...   261   9e-68
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ...   238   5e-61
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   232   4e-59
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   209   2e-52
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   207   1e-51

>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Glycine max]
          Length = 819

 Score =  261 bits (666), Expect = 9e-68
 Identities = 131/206 (63%), Positives = 162/206 (78%)
 Frame = -2

Query: 620  KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
            KA  L + ML  +VEP K+MYSK++AALCQ G+MK+AR  FD  + RGF PDV+TYTIMI
Sbjct: 594  KAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMI 653

Query: 440  NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
            NSYCR +CL++AH+LF DM+RRGIKPDVIT+TVLLDG LK    KR  S  HGK KT  L
Sbjct: 654  NSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSS--HGKRKTTSL 711

Query: 260  DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
             VS I R+M+QM+++ D V YTVL+DG +KTDN Q A+ LFD+MI+ GL+PD +TYTAL+
Sbjct: 712  YVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALV 771

Query: 80   SALCKRGNMKKAEILLNEMSSKGMTP 3
            S LC RG+++KA  LLNEMSSKGMTP
Sbjct: 772  SGLCNRGHVEKAVTLLNEMSSKGMTP 797



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 55/261 (21%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVP--------- 468
           KA  ++E +      P    Y+ VI ALC++G++K     F+     G +P         
Sbjct: 213 KALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYI 272

Query: 467 --------------------------DVITYTIMINSYCREDCLEKAHELFLDMERRGIK 366
                                     +V  YT ++  +C E  L++A  +F DMER+G+ 
Sbjct: 273 EGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVV 332

Query: 365 PDVITYTVLLDGRLKLANLKRDLSPP-------------------HGKGKTAM-LDVSAI 246
           PDV  Y+ L+ G  K  NL R L+                     H  G+  M L+V   
Sbjct: 333 PDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQ 392

Query: 245 CREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALISALCK 66
            +E+K+  +  D V Y ++ D       ++DA+ + +EM    L  D+  YT LI+  C 
Sbjct: 393 FKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCL 452

Query: 65  RGNMKKAEILLNEMSSKGMTP 3
           +G++  A  +  EM  KG+ P
Sbjct: 453 QGDLVTAFNMFKEMKEKGLKP 473



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
 Frame = -2

Query: 560 YSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFLDME 381
           Y+ V+   C E  +  A+  FD    +G VPDV  Y+ +I+ YC+   L +A  L  +M 
Sbjct: 303 YTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMI 362

Query: 380 RRGIKPDVITYTVLLDG------RLKLANLKRDL--SPPHGKGKTAMLDVSAIC------ 243
            RG+K + +  + +L         L++ +  ++L  S     G    +   A+C      
Sbjct: 363 SRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVE 422

Query: 242 ------REMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
                  EMK   +  D   YT LI+G     +L  A  +F EM + GL+PDIVTY  L 
Sbjct: 423 DAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLA 482

Query: 80  SALCKRGNMKKAEILLNEMSSKGMTP 3
           + L + G+ ++   LL+ M S+GM P
Sbjct: 483 AGLSRNGHARETVKLLDFMESQGMKP 508



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 53/204 (25%), Positives = 94/204 (46%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
           +A  L + M+S  V+   V+ S ++  L + G        F    E G   D + Y I+ 
Sbjct: 353 RALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVF 412

Query: 440 NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
           ++ C    +E A E+  +M+ + +  DV  YT L++G      L+ DL           +
Sbjct: 413 DALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYC----LQGDL-----------V 457

Query: 260 DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
               + +EMK+  +  D VTY VL  G  +  + ++ + L D M   G++P+  T+  +I
Sbjct: 458 TAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMII 517

Query: 80  SALCKRGNMKKAEILLNEMSSKGM 9
             LC  G + +AE+  N +  K +
Sbjct: 518 EGLCSGGKVLEAEVYFNSLEDKNI 541



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
 Frame = -2

Query: 566  VMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFLD 387
            V Y+ V  ALC  G ++ A    +    +    DV  YT +IN YC +  L  A  +F +
Sbjct: 406  VAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKE 465

Query: 386  MERRGIKPDVITYTVLLDGRLKLANLKR-----DLSPPHG---KGKTAMLDVSAICREMK 231
            M+ +G+KPD++TY VL  G  +  + +      D     G      T  + +  +C   K
Sbjct: 466  MKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGK 525

Query: 230  QMEVSA--------DAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALISA 75
             +E           +   Y+ +++G  +TD ++ +  +F ++++ G      +   L+S 
Sbjct: 526  VLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSK 585

Query: 74   LCKRGNMKKAEILLNEMSSKGMTP 3
            LC  G+++KA  LL+ M    + P
Sbjct: 586  LCMTGDIEKAVKLLDRMLLSNVEP 609



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/177 (25%), Positives = 84/177 (47%)
 Frame = -2

Query: 539 LCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFLDMERRGIKPD 360
           L + G +  A   ++     GF+P+  TY I+I + C++  L++   +F +MER G+ P 
Sbjct: 205 LVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPH 264

Query: 359 VITYTVLLDGRLKLANLKRDLSPPHGKGKTAMLDVSAICREMKQMEVSADAVTYTVLIDG 180
              +   ++G     N + DL                + +  ++     +   YT ++ G
Sbjct: 265 SYCFAAYIEGLCN--NHRSDLG-------------YEVLQAFRKGNAPLEVYAYTAVVRG 309

Query: 179 CIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGM 9
                 L +A G+FD+M   G+ PD+  Y++LI   CK  N+ +A  L +EM S+G+
Sbjct: 310 FCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGV 366



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/98 (32%), Positives = 48/98 (48%)
 Frame = -2

Query: 614  SVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINS 435
            S +   M  M + P  V Y+ ++    +  N + A   FD  IE G  PD ITYT +++ 
Sbjct: 714  STILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSG 773

Query: 434  YCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLK 321
             C    +EKA  L  +M  +G+ PDV   + L  G +K
Sbjct: 774  LCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIK 811


>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491298|gb|AES72501.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  238 bits (608), Expect = 5e-61
 Identities = 122/189 (64%), Positives = 141/189 (74%)
 Frame = -2

Query: 569  KVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFL 390
            KV+YSKV+A LCQ+GNM+ AR  FDF + RGF PDV+TYTIMI SYC  +CL++AH+LF 
Sbjct: 585  KVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQ 644

Query: 389  DMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAMLDVSAICREMKQMEVSAD 210
            DM+ RGIKPDVITYTVLLDG+ K A  K   S  HGKGK A  DVS I R+MK  EVS D
Sbjct: 645  DMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPD 704

Query: 209  AVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALISALCKRGNMKKAEILLN 30
             V YTVLIDG IK DN +DAI LF+E++  GL+PD VTYTAL S L   GN + A  L N
Sbjct: 705  VVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYN 764

Query: 29   EMSSKGMTP 3
            EMSSKGMTP
Sbjct: 765  EMSSKGMTP 773



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDF--SIERGFVP-DVITYT 450
           +AS +F+ M    V P    Y+  I  LC   N   +   +D   ++     P DV  YT
Sbjct: 248 QASGVFDEMKEAGVTPNSYCYAAYIEGLC---NNHQSDLGYDLLRALRENNAPIDVYAYT 304

Query: 449 IMINSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHG---K 279
            +I  +C E  L+KA ++F DME + + PD   Y+ L+ G  K  +L + L        K
Sbjct: 305 AVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILK 364

Query: 278 G-KTAMLDVSAIC----------------REMKQMEVSADAVTYTVLIDGCIKTDNLQDA 150
           G KT  + VS I                 +E+KQ  V  D V Y ++ D   K   + + 
Sbjct: 365 GIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEV 424

Query: 149 IGLFDEMIDIGLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGMTP 3
            G+ +++  + +  DI  YT  I   C +G   KA I+  EM  KG  P
Sbjct: 425 AGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKP 473



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
 Frame = -2

Query: 608  LFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYC 429
            + E + SM ++     Y+  I   C +G    A   F    E+GF PDV+ Y ++    C
Sbjct: 427  MLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLC 486

Query: 428  REDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLK------RDLSPPHGKGKTA 267
                + +A +L   M+ +G+KP+  T+ ++++G      ++        +     +  TA
Sbjct: 487  GNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTA 546

Query: 266  MLDVSAICREMKQMEVSAD----------------------AVTYTVLIDGCIKTDNLQD 153
            M  VS  C E   +E S +                       V Y+ ++    +  N+Q 
Sbjct: 547  M--VSGYC-EADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQR 603

Query: 152  AIGLFDEMIDIGLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGMTP 3
            A  LFD  +  G  PD+VTYT +I + C    +++A  L  +M S+G+ P
Sbjct: 604  ARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKP 653


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial [Vitis vinifera]
          Length = 817

 Score =  232 bits (592), Expect = 4e-59
 Identities = 119/207 (57%), Positives = 150/207 (72%), Gaps = 1/207 (0%)
 Frame = -2

Query: 620  KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
            KA +L E ML++DVEP ++MY K+I A C++G+MK A+  FD  +ERG  PDVITYT+MI
Sbjct: 591  KALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650

Query: 440  NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKG-KTAM 264
            N YCR +CL +A ++F DM+ RGIKPDVITYTV+LDG  K+ NLK   S    KG +   
Sbjct: 651  NGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEEEK 709

Query: 263  LDVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTAL 84
            +D S    EMK+M +  D V YTVLID   KT+NLQDAI L+DEMI  GLQPDIVTYTAL
Sbjct: 710  MDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTAL 769

Query: 83   ISALCKRGNMKKAEILLNEMSSKGMTP 3
            +S+ C RG+M +A  L+NEMS KG+ P
Sbjct: 770  LSSCCSRGDMDRAITLVNEMSFKGIEP 796



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 56/202 (27%), Positives = 98/202 (48%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
           +A  L   M+S  ++   V+ S ++  LC+ G        F    + G   D + Y I++
Sbjct: 350 QAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409

Query: 440 NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
           ++ C+   +E+A EL  +M+ R +  DV+ YT L+ G                +GK  ++
Sbjct: 410 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL-------------QGK--LV 454

Query: 260 DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
           D   +  EMK+  +  D VTY +L+ G  +    ++A+ L D +   GL+P+  T+  +I
Sbjct: 455 DAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 514

Query: 80  SALCKRGNMKKAEILLNEMSSK 15
             LC  G +K+AE  LN +  K
Sbjct: 515 EGLCMAGKVKEAEAFLNTLEDK 536



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
 Frame = -2

Query: 560 YSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFLDME 381
           Y+ VI   C E  +K A   F   +  G  PD   Y  +I++YC+   L +A  L  DM 
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359

Query: 380 RRGIKPDVITYTVLLDGRLKLANLKRDLSP-PHGKGKTAMLD-------VSAICR----- 240
             GIK + +  + +L    ++      +      +     LD       V A+C+     
Sbjct: 360 SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 419

Query: 239 -------EMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
                  EMK   +S D V YT LI G      L DA  +F+EM + G++PDIVTY  L+
Sbjct: 420 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 479

Query: 80  SALCKRGNMKKAEILLNEMSSKGMTP 3
               + G  K+A  LL+ + ++G+ P
Sbjct: 480 GGFSRNGLKKEALELLDCIGTQGLKP 505



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 55/260 (21%)
 Frame = -2

Query: 617 ASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVIT------ 456
           A  ++  +  + + P    Y   I ALC++GN + A   F    E G  P+ +T      
Sbjct: 211 AVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIE 270

Query: 455 -----------------------------YTIMINSYCREDCLEKAHELFLDMERRGIKP 363
                                        YT +I  +C E  L++A ++F+DM   GI P
Sbjct: 271 GLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330

Query: 362 DVITYTVLLDGRLKLANLKRDLSPPHGKG----KTAMLDVSAIC---------------- 243
           D   Y  L+    K  NL + ++  +       KT  + VS+I                 
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQF 390

Query: 242 REMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALISALCKR 63
           +E +   +  D V Y +++D   K   +++A+ L +EM    +  D+V YT LI+  C +
Sbjct: 391 KEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQ 450

Query: 62  GNMKKAEILLNEMSSKGMTP 3
           G +  A+ +  EM  +G+ P
Sbjct: 451 GKLVDAKNMFEEMKERGIEP 470



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
 Frame = -2

Query: 569  KVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFL 390
            +V+Y+ V+ ALC+ G ++ A    +    R    DV+ YT +I  YC +  L  A  +F 
Sbjct: 402  EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461

Query: 389  DMERRGIKPDVITYTVLLDGRLKLANLKRDLS----------PPHGKGKTAMLDVSAICR 240
            +M+ RGI+PD++TY +L+ G  +    K  L            P+      +++   +  
Sbjct: 462  EMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 239  EMKQMEVSADAV------TYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALIS 78
            ++K+ E   + +       Y+ ++DG  K +  + A  LF  +   G+     +   L+S
Sbjct: 522  KVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581

Query: 77   ALCKRGNMKKAEILLNEMSSKGMTP 3
            +LC  G   KA ILL  M +  + P
Sbjct: 582  SLCMEGEYDKALILLERMLALDVEP 606



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = -2

Query: 617  ASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMIN 438
            AS  +  M  M ++P  V Y+ +I + C+  N++ A   +D  I RG  PD++TYT +++
Sbjct: 712  ASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLS 771

Query: 437  SYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLK 321
            S C    +++A  L  +M  +GI+PD    +VL  G LK
Sbjct: 772  SCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILK 810


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  209 bits (533), Expect = 2e-52
 Identities = 107/207 (51%), Positives = 151/207 (72%), Gaps = 4/207 (1%)
 Frame = -2

Query: 611  VLFETMLSMDVEPGKVMYSKVIAALCQEGN---MKHARFWFDFSIERGFVPDVITYTIMI 441
            +L ETML+++VEP K +Y K+  +LC+ G    M+ A+  FD  ++RG+ PD+I YTIMI
Sbjct: 599  MLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMI 658

Query: 440  NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTA-M 264
             SYCR +CL++A +LF DM++RGIKPD++T+TVLLDG  K A++K+  S  + KG    +
Sbjct: 659  TSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHK-AHIKKVYSAANAKGGNEDI 717

Query: 263  LDVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTAL 84
             D  AI  EMK  E+  D + YTVLIDG  K D+L DAIG+FDEMI+ GL+PDI+TYTAL
Sbjct: 718  FDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTAL 777

Query: 83   ISALCKRGNMKKAEILLNEMSSKGMTP 3
            +S  C+RG++ +A  LL++MS KG++P
Sbjct: 778  LSGCCQRGDVDRAVNLLDQMSLKGISP 804



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 53/204 (25%), Positives = 95/204 (46%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
           KA      M+S  V+   V+   ++  LC+ G        F+     G   D ++Y  ++
Sbjct: 356 KAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVV 415

Query: 440 NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
           ++ C+   LE+A  L  +M+ + I  DV+ YT L++G     N+               +
Sbjct: 416 DALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNV---------------V 460

Query: 260 DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
           D   +  EM++  +  D VTY VL+ G  +     +A+ L D M    L+P+ +TY  ++
Sbjct: 461 DAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVV 520

Query: 80  SALCKRGNMKKAEILLNEMSSKGM 9
            +LC  G +K+AE + N +  K +
Sbjct: 521 ESLCMGGKVKEAEAVFNSIEDKSL 544



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 90/295 (30%)
 Frame = -2

Query: 617  ASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVP---------- 468
            A  +++ +  + + P    Y+ VI ALC  G+++ A +      E G  P          
Sbjct: 217  ALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIE 276

Query: 467  -------------------------DVITYTIMINSYCREDCLEKAHELFLDMERRGIKP 363
                                     D+  YT+ +  +C E   +KA  +  DME+ G+ P
Sbjct: 277  GLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVP 336

Query: 362  DVITYTVLLDGRLKLANLKRD---LSPPHGKGKTA------------------------- 267
            D+  YT L+    K  NL +    L+    KG                            
Sbjct: 337  DMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQF 396

Query: 266  --------MLD-------VSAICR------------EMKQMEVSADAVTYTVLIDGCIKT 168
                     LD       V A+C+            EMK  +++ D + YT LI+G    
Sbjct: 397  NQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQ 456

Query: 167  DNLQDAIGLFDEMIDIGLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGMTP 3
             N+ DA  +F+EM + G++ D+VTY  L+S  C+ G   +A  LL+ M ++ + P
Sbjct: 457  GNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKP 511



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/99 (33%), Positives = 54/99 (54%)
 Frame = -2

Query: 617  ASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMIN 438
            A  ++  M   +++P  + Y+ +I   C+  ++  A   FD  IERG  PD+ITYT +++
Sbjct: 720  ALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLS 779

Query: 437  SYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLK 321
              C+   +++A  L   M  +GI PD  T + LL G LK
Sbjct: 780  GCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILK 818


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  207 bits (527), Expect = 1e-51
 Identities = 107/206 (51%), Positives = 142/206 (68%)
 Frame = -2

Query: 620  KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
            KA  L ETM+++++ P  +MYSKVI AL Q G M+ A++ F+  ++RG  PDVITYTIMI
Sbjct: 583  KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642

Query: 440  NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
            N YCR + +++A  +  DM+ RGI+PDVITYTVLL+   K+       S    K K  M+
Sbjct: 643  NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMM 702

Query: 260  DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
            D SA+  EMK M++  D + YTVLID   KT+N+QDAI LF+EMID GL PD VTYTAL+
Sbjct: 703  DPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762

Query: 80   SALCKRGNMKKAEILLNEMSSKGMTP 3
            S  C  GN+KKA +L +EM +KG+ P
Sbjct: 763  SGYCNVGNIKKAVVLFDEMLNKGIRP 788



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 58/202 (28%), Positives = 96/202 (47%)
 Frame = -2

Query: 620 KASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMI 441
           KA  L + M+S  V+   V+ S ++  L Q G        F    + G   D   Y +++
Sbjct: 342 KALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVM 401

Query: 440 NSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAML 261
           ++ C+   +E+A EL ++M+ + + PD+I YT ++ G                KGK  ++
Sbjct: 402 DALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFL-------------KGK--VV 446

Query: 260 DVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
           D   I REMK +    D VTY VL  G  +    Q+A+ L + M   G++PD VT+  +I
Sbjct: 447 DALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMII 506

Query: 80  SALCKRGNMKKAEILLNEMSSK 15
             LC  G +  A+   + +  K
Sbjct: 507 EGLCIGGKVDDAQAFFDNLEEK 528



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
 Frame = -2

Query: 560 YSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINSYCREDCLEKAHELFLDME 381
           Y+ VI   C E  +K A        ++GF PDV  Y  +I+ YC    L KA  L  +M 
Sbjct: 292 YTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMV 351

Query: 380 RRGIKPDVITYTVLLDGRLKL------ANLKRDLSPPHGKGKTAMLDV--SAICR----- 240
            +G+K + +  + +L G  ++      AN  ++          A  +V   A+C+     
Sbjct: 352 SKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVE 411

Query: 239 -------EMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIVTYTALI 81
                  EMK  ++  D + YT +I G      + DA+ ++ EM DIG +PDIVTY  L 
Sbjct: 412 EAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLA 471

Query: 80  SALCKRGNMKKAEILLNEMSSKGMTP 3
               + G  ++A  LLN M ++G+ P
Sbjct: 472 GGFSRNGLTQEALSLLNYMETQGVKP 497



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 51/157 (32%), Positives = 77/157 (49%)
 Frame = -2

Query: 479 GFVPDVITYTIMINSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRD 300
           G  P+  TYTI I  +CR+  L +A ++F DME  G+ P+  +YT  ++G          
Sbjct: 214 GLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCL------- 266

Query: 299 LSPPHGKGKTAMLDVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDI 120
               HG+          + +++   ++  D   YTV+I G      L++A  +  EM   
Sbjct: 267 ----HGRSDLGF----KVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQ 318

Query: 119 GLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGM 9
           G  PD+  Y ALIS  C  GN+ KA  L +EM SKG+
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGV 355



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 58/240 (24%), Positives = 90/240 (37%), Gaps = 35/240 (14%)
 Frame = -2

Query: 617 ASVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMIN 438
           A  ++  + +  + P    Y+  I   C++GN+  A   F    E G  P+  +YT  I 
Sbjct: 203 AIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIE 262

Query: 437 SYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRDLSPPHGKGKTAMLD 258
             C     +   ++  D+    I  DV  YTV++ G      LK               +
Sbjct: 263 GLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLK---------------E 307

Query: 257 VSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDIGLQPDIV------- 99
             +I REM++   + D   Y  LI G     NL  A+ L DEM+  G++ + V       
Sbjct: 308 AESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQ 367

Query: 98  ----------------------------TYTALISALCKRGNMKKAEILLNEMSSKGMTP 3
                                        Y  ++ ALCK G +++A  LL EM  K M P
Sbjct: 368 GLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVP 427



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/92 (36%), Positives = 55/92 (59%)
 Frame = -2

Query: 614 SVLFETMLSMDVEPGKVMYSKVIAALCQEGNMKHARFWFDFSIERGFVPDVITYTIMINS 435
           S L+  M  MD++P  + Y+ +I   C+  N++ A   F+  I+RG  PD +TYT +++ 
Sbjct: 705 SALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSG 764

Query: 434 YCREDCLEKAHELFLDMERRGIKPDVITYTVL 339
           YC    ++KA  LF +M  +GI+PD  T +VL
Sbjct: 765 YCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/159 (21%), Positives = 71/159 (44%)
 Frame = -2

Query: 479 GFVPDVITYTIMINSYCREDCLEKAHELFLDMERRGIKPDVITYTVLLDGRLKLANLKRD 300
           GF P +++   ++N       ++ A  ++  ++  G+ P+  TYT+ + G  +  NL   
Sbjct: 179 GFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238

Query: 299 LSPPHGKGKTAMLDVSAICREMKQMEVSADAVTYTVLIDGCIKTDNLQDAIGLFDEMIDI 120
           +                + R+M++  V+ ++ +YT  I+G            +  ++I+ 
Sbjct: 239 ID---------------VFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINA 283

Query: 119 GLQPDIVTYTALISALCKRGNMKKAEILLNEMSSKGMTP 3
            +  D+  YT +I   C    +K+AE +L EM  +G  P
Sbjct: 284 KIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAP 322