BLASTX nr result

ID: Glycyrrhiza23_contig00029166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029166
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicag...   239   2e-61
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   196   1e-48
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   194   6e-48
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   192   3e-47

>ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 497

 Score =  239 bits (610), Expect = 2e-61
 Identities = 125/142 (88%), Positives = 130/142 (91%)
 Frame = +2

Query: 17  MGEEKQRSSIPALPWMRDPVDVTLCPQLPLDSVPSLHPKLKLALESMGIWTLFPVQVAVW 196
           MGEEKQ+S IPALPWMRDPVDVTL  QLPL SVPSLHPKLK ALE MGI  LFPVQVAVW
Sbjct: 1   MGEEKQQS-IPALPWMRDPVDVTLTQQLPLHSVPSLHPKLKSALEDMGISNLFPVQVAVW 59

Query: 197 QETVGPGNFQRDICVNSPTGSGKTLAYALPIAQMLSTRVVTRCLRALVVVPTRDLALQVK 376
            ETVGPGNF+RDICVNSPTGSGKTLAYALP+ QMLS R VT+CLRALVVVPTRDLALQVK
Sbjct: 60  HETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGR-VTKCLRALVVVPTRDLALQVK 118

Query: 377 RVFDAVASPLGLRVGLAVGQSS 442
           +VFDAVASPLGLRVGLAVGQSS
Sbjct: 119 QVFDAVASPLGLRVGLAVGQSS 140


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/138 (70%), Positives = 117/138 (84%)
 Frame = +2

Query: 29  KQRSSIPALPWMRDPVDVTLCPQLPLDSVPSLHPKLKLALESMGIWTLFPVQVAVWQETV 208
           KQ  ++P LPWMR PVDV+   + PLD +P L P+LK+AL++MG  TLFPVQ+AVWQET+
Sbjct: 8   KQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETI 67

Query: 209 GPGNFQRDICVNSPTGSGKTLAYALPIAQMLSTRVVTRCLRALVVVPTRDLALQVKRVFD 388
           GPG F+RD+C+NSPTGSGKTLAYALPI Q+LSTR V +CLRALVV+PTRDLALQVK+VF 
Sbjct: 68  GPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAV-KCLRALVVLPTRDLALQVKQVFA 126

Query: 389 AVASPLGLRVGLAVGQSS 442
           A+A  +GL VGLAVGQSS
Sbjct: 127 AIAPAMGLSVGLAVGQSS 144


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/142 (67%), Positives = 118/142 (83%)
 Frame = +2

Query: 17  MGEEKQRSSIPALPWMRDPVDVTLCPQLPLDSVPSLHPKLKLALESMGIWTLFPVQVAVW 196
           M ++++R  IP LPWMR PVDV+L  + PL+ +P L  +LK AL++MGI +LFPVQ+AVW
Sbjct: 1   MADKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVW 60

Query: 197 QETVGPGNFQRDICVNSPTGSGKTLAYALPIAQMLSTRVVTRCLRALVVVPTRDLALQVK 376
           QE +GPG+F RD+C+NSPTGSGKTLAYALPI QMLS+R V +CLRALVV+PTRDLALQVK
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTV-KCLRALVVLPTRDLALQVK 119

Query: 377 RVFDAVASPLGLRVGLAVGQSS 442
            VF A+A  +GL VGLAVGQSS
Sbjct: 120 EVFSAIAPAVGLSVGLAVGQSS 141


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  194 bits (493), Expect = 6e-48
 Identities = 95/142 (66%), Positives = 117/142 (82%)
 Frame = +2

Query: 17  MGEEKQRSSIPALPWMRDPVDVTLCPQLPLDSVPSLHPKLKLALESMGIWTLFPVQVAVW 196
           M E KQ+ ++P LPWMR P+DV+L  + PL   P L P+L++AL++MG  +LFPVQVAVW
Sbjct: 1   MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW 60

Query: 197 QETVGPGNFQRDICVNSPTGSGKTLAYALPIAQMLSTRVVTRCLRALVVVPTRDLALQVK 376
           QETVGPG F+RD+C+NSPTGSGKTLAYALPI  +LS+R V +CLRALVV+PTRDLALQVK
Sbjct: 61  QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAV-KCLRALVVLPTRDLALQVK 119

Query: 377 RVFDAVASPLGLRVGLAVGQSS 442
            VF A+A  +GL VGLAVGQ+S
Sbjct: 120 EVFAAIAPAVGLSVGLAVGQTS 141


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  192 bits (487), Expect = 3e-47
 Identities = 96/143 (67%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
 Frame = +2

Query: 17  MGEEK-QRSSIPALPWMRDPVDVTLCPQLPLDSVPSLHPKLKLALESMGIWTLFPVQVAV 193
           M E K ++ ++P LPWMR PVD+    +  LD VP L P+LK+ALE+MG  +LF VQVAV
Sbjct: 1   MEESKLEKKNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAV 60

Query: 194 WQETVGPGNFQRDICVNSPTGSGKTLAYALPIAQMLSTRVVTRCLRALVVVPTRDLALQV 373
           WQET+GPGNF+RD+C+N+PTGSGKTLAYALPI QMLSTR + +CLRAL+V+PTRDLALQV
Sbjct: 61  WQETIGPGNFERDLCINAPTGSGKTLAYALPIIQMLSTRSI-KCLRALIVLPTRDLALQV 119

Query: 374 KRVFDAVASPLGLRVGLAVGQSS 442
           K+VF A+A  +GL VGLAVGQSS
Sbjct: 120 KQVFAALAPAVGLSVGLAVGQSS 142


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