BLASTX nr result

ID: Glycyrrhiza23_contig00029154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029154
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610797.1| hypothetical protein MTR_5g007110 [Medicago ...   118   4e-25
ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   116   2e-24
ref|XP_003610795.1| F-box/LRR-repeat protein [Medicago truncatul...   102   3e-20
ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatul...    87   1e-15
ref|NP_001237460.1| uncharacterized protein LOC100500144 [Glycin...    82   5e-14

>ref|XP_003610797.1| hypothetical protein MTR_5g007110 [Medicago truncatula]
           gi|355512132|gb|AES93755.1| hypothetical protein
           MTR_5g007110 [Medicago truncatula]
          Length = 284

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/113 (58%), Positives = 84/113 (74%)
 Frame = -1

Query: 339 PAGAFLLLKQFSQMKCIKFYGAAVLTPELDILPVFAMLSDLELGWVTGEVLLGLLQKSPV 160
           P   F LLKQFS  + IKF  + VL    ++  VF ML+DLE+G V+ E+LL LLQK+PV
Sbjct: 128 PFEPFHLLKQFSHARSIKFEVSKVLMQPKELC-VFPMLTDLEVGLVSVEILLALLQKTPV 186

Query: 159 LKTLVLKGISKFDQDLSNSVVVPECLASTFQVVKFEEIDGDEHELFLAKYFME 1
           LKTLVLKGI  F+++L NS VVPECLAS   VVKFEE++GD+HEL LA++ +E
Sbjct: 187 LKTLVLKGIRTFEEELLNSSVVPECLAS-LHVVKFEEVNGDDHELILAQFLVE 238


>ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478591|gb|AES59794.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 523

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/112 (55%), Positives = 83/112 (74%), Gaps = 5/112 (4%)
 Frame = -1

Query: 321 LLKQFSQMKCIKFYGAAVLTPELDIL-----PVFAMLSDLELGWVTGEVLLGLLQKSPVL 157
           LLKQF ++K IK  G   L   +++L     PVF++LS+LELG VT EVL+ LLQ SP+L
Sbjct: 370 LLKQFHRVKSIKIEG---LDLNIEVLKKANVPVFSLLSNLELGLVTVEVLITLLQNSPIL 426

Query: 156 KTLVLKGISKFDQDLSNSVVVPECLASTFQVVKFEEIDGDEHELFLAKYFME 1
           KTLVLKGI  F ++  NS V+P C+ S+ QVVKFE+++G +HE+FLAK+FME
Sbjct: 427 KTLVLKGIHSFAEEFLNSAVLPHCVVSSLQVVKFEKVNGAKHEMFLAKFFME 478


>ref|XP_003610795.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512130|gb|AES93753.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 504

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/107 (53%), Positives = 77/107 (71%)
 Frame = -1

Query: 321 LLKQFSQMKCIKFYGAAVLTPELDILPVFAMLSDLELGWVTGEVLLGLLQKSPVLKTLVL 142
           +L Q S  K I+F  + V     + L VF+ L+ LE+G ++ + LL LLQK+PVLKTLVL
Sbjct: 318 ILNQLSHAKSIQFEASEVDLMLPEHLCVFSTLTHLEVGLISVDNLLVLLQKTPVLKTLVL 377

Query: 141 KGISKFDQDLSNSVVVPECLASTFQVVKFEEIDGDEHELFLAKYFME 1
           KGI KF ++  +S VVPECLAS   VVKF+E++GD H+LFLAK+FM+
Sbjct: 378 KGICKFKEERLSSAVVPECLAS-LHVVKFKEVNGDNHDLFLAKFFMK 423


>ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512001|gb|AES93624.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 494

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 AFLLLKQFSQMKCIKFYGAAVLTPELDI---LPVFAMLSDLELGWVTGEVLLGLLQKSPV 160
           A  LL +FS  K IKF  + VL  +  +   L VF ML+ LE+G+V+ ++LL LLQK+PV
Sbjct: 336 AAALLGEFSHSKSIKFESSKVLDLKKMLPKKLCVFPMLTHLEVGFVSVDILLTLLQKAPV 395

Query: 159 LKTLVLKGISKFDQDLSNSVVVPECLASTFQVVKFEEIDGDEHELFLAKYFME 1
           L+TLVLK I  F ++L +S  VP+ LA    VVKFE++ G++ EL LAKYF++
Sbjct: 396 LETLVLKEICDFGEELLSSADVPKRLA-FLHVVKFEQVIGEDLELSLAKYFLD 447


>ref|NP_001237460.1| uncharacterized protein LOC100500144 [Glycine max]
           gi|255629454|gb|ACU15073.1| unknown [Glycine max]
          Length = 171

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = -1

Query: 375 LENLGMLFQNQCPAGAFLLLKQFSQMKCIKFYGAAVLTPELDI---LPVFAMLSDLELGW 205
           +ENLG    N        LL Q  +++ +K     VL    DI   LP F  L+ L+L  
Sbjct: 1   MENLGFKVYN--------LLAQIREVERLKLLFYKVLMHVSDIFSHLPAFGRLASLQLNE 52

Query: 204 VTGEVLLGLLQKSPVLKTLVLK-GISKFDQDLSNSVVVPECLASTFQVVKFEEIDGDEHE 28
           VTGE LL +L  SP L TLVLK G+S+ ++D+  S  VP+C  S+ +V +F+E +  EHE
Sbjct: 53  VTGEALLNILHNSPFLNTLVLKNGVSELNKDVLTSASVPQCFQSSLRVFQFKEFNVHEHE 112

Query: 27  LFLAKYFM 4
           L L K+ M
Sbjct: 113 LLLLKFVM 120


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