BLASTX nr result

ID: Glycyrrhiza23_contig00029144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029144
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   160   1e-37
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   152   4e-35
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...   142   3e-32
dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]        142   3e-32

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/87 (85%), Positives = 80/87 (91%)
 Frame = -2

Query: 266  IEKVAPKVAKRRNMLEKLVNDPTEGNAWHADHIVPVYKGGGECKLENMRTLCVACHCDVT 87
            IEKVAPKVAKR+ M EKLVN+PTEGNAWHADHIVPVY GGGECKLEN+RTLCVACH DVT
Sbjct: 1072 IEKVAPKVAKRKKMFEKLVNEPTEGNAWHADHIVPVYDGGGECKLENLRTLCVACHYDVT 1131

Query: 86   AVQCAERRIMRANARKQLRVLMNNMKN 6
            A QCAERRI +ANARKQL+ LMN+MKN
Sbjct: 1132 AAQCAERRIAKANARKQLKALMNSMKN 1158


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/88 (76%), Positives = 81/88 (92%)
 Frame = -2

Query: 266  IEKVAPKVAKRRNMLEKLVNDPTEGNAWHADHIVPVYKGGGECKLENMRTLCVACHCDVT 87
            IEKVAP++A R+N+L+KLVNDPTEGNAWHADHIVPVY+GGGEC+LENMRTLCV CH DVT
Sbjct: 1123 IEKVAPRLAVRKNLLDKLVNDPTEGNAWHADHIVPVYQGGGECRLENMRTLCVGCHSDVT 1182

Query: 86   AVQCAERRIMRANARKQLRVLMNNMKND 3
            A QCAERR +R  A+KQL+V+MN++K+D
Sbjct: 1183 AAQCAERRSVRIKAKKQLKVIMNSLKDD 1210


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/88 (76%), Positives = 81/88 (92%)
 Frame = -2

Query: 266  IEKVAPKVAKRRNMLEKLVNDPTEGNAWHADHIVPVYKGGGECKLENMRTLCVACHCDVT 87
            IEKVAP++A R+N+L+KLVNDPTEGNAWHADHIVPVY+GGGEC+LENMRTLCV CH DVT
Sbjct: 1044 IEKVAPRLAVRKNLLDKLVNDPTEGNAWHADHIVPVYQGGGECRLENMRTLCVGCHSDVT 1103

Query: 86   AVQCAERRIMRANARKQLRVLMNNMKND 3
            A QCAERR +R  A+KQL+V+MN++K+D
Sbjct: 1104 AAQCAERRSVRIKAKKQLKVIMNSLKDD 1131


>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
            gi|332003824|gb|AED91207.1| SNF2 and helicase
            domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score =  142 bits (358), Expect = 3e-32
 Identities = 61/88 (69%), Positives = 77/88 (87%)
 Frame = -2

Query: 266  IEKVAPKVAKRRNMLEKLVNDPTEGNAWHADHIVPVYKGGGECKLENMRTLCVACHCDVT 87
            I K AP++  R+N+LE LVNDPTEGNAWHADHI+PVY+GGGEC+LENMRTLCVACH DVT
Sbjct: 1057 INKAAPELFARKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVT 1116

Query: 86   AVQCAERRIMRANARKQLRVLMNNMKND 3
            A QCAER+++R+ ARKQL+  +N ++N+
Sbjct: 1117 AAQCAERKLIRSKARKQLKNTLNELRNN 1144


>dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1178

 Score =  142 bits (358), Expect = 3e-32
 Identities = 61/88 (69%), Positives = 77/88 (87%)
 Frame = -2

Query: 266  IEKVAPKVAKRRNMLEKLVNDPTEGNAWHADHIVPVYKGGGECKLENMRTLCVACHCDVT 87
            I K AP++  R+N+LE LVNDPTEGNAWHADHI+PVY+GGGEC+LENMRTLCVACH DVT
Sbjct: 1045 INKAAPELFARKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVT 1104

Query: 86   AVQCAERRIMRANARKQLRVLMNNMKND 3
            A QCAER+++R+ ARKQL+  +N ++N+
Sbjct: 1105 AAQCAERKLIRSKARKQLKNTLNELRNN 1132


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