BLASTX nr result

ID: Glycyrrhiza23_contig00029109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029109
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...    86   1e-24
ref|XP_003613415.1| Structural maintenance of chromosomes protei...    79   1e-20
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m...    73   3e-18
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos...    73   3e-18
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...    72   6e-18

>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Glycine max]
          Length = 1059

 Score = 85.5 bits (210), Expect(2) = 1e-24
 Identities = 44/68 (64%), Positives = 47/68 (69%)
 Frame = +2

Query: 5   DVERVRQRDELLAKAESMKKKVPWLRYDMKQAEYREAKDRXXXXXXXXXXXXXXXXXXXX 184
           DVERVRQRDELLAKAE+MKKK+PWLRYDMKQAEYREAK+R                    
Sbjct: 221 DVERVRQRDELLAKAEAMKKKLPWLRYDMKQAEYREAKERENDAAKALEEAAELLNDLKE 280

Query: 185 PIKKQKEE 208
           PI KQKEE
Sbjct: 281 PIMKQKEE 288



 Score = 52.4 bits (124), Expect(2) = 1e-24
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +1

Query: 199 KRGKGCIRCKM*KVSSRLDSNAKKRFELKEKENQLDVELQGKYKDM 336
           K  K  +  K  KVS+    NAKKR EL E+EN+LDVEL+GKYK+M
Sbjct: 286 KEEKAALYAKCKKVSNHASENAKKRTELMEEENKLDVELKGKYKEM 331


>ref|XP_003613415.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355514750|gb|AES96373.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 438

 Score = 79.0 bits (193), Expect(2) = 1e-20
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = +2

Query: 2   KDVERVRQRDELLAKAESMKKKVPWLRYDMKQAEYREAKDRXXXXXXXXXXXXXXXXXXX 181
           KDVERVRQRDEL AKA+ M+KK+PWL+YDMKQAEYREAK+R                   
Sbjct: 221 KDVERVRQRDELRAKAKLMEKKLPWLKYDMKQAEYREAKEREKTAAKESEKANKLLNELK 280

Query: 182 XPIKKQKEE 208
            PIKKQ +E
Sbjct: 281 EPIKKQNDE 289



 Score = 45.4 bits (106), Expect(2) = 1e-20
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 208 KGCIRCKM*KVSSRLDSNAKKRFELKEKENQLDVELQGKYKDM 336
           K  +  K  KVS RL  NA KR  L EKE+QL+VELQG YK+M
Sbjct: 290 KDALAEKWRKVSDRLIENADKRKGLLEKESQLEVELQGNYKEM 332


>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 5-like [Cucumis sativus]
          Length = 1053

 Score = 72.8 bits (177), Expect(2) = 3e-18
 Identities = 37/69 (53%), Positives = 43/69 (62%)
 Frame = +2

Query: 2   KDVERVRQRDELLAKAESMKKKVPWLRYDMKQAEYREAKDRXXXXXXXXXXXXXXXXXXX 181
           KDVE VRQRDELL K ESMKKK+PWL+YDMK+AEY E K++                   
Sbjct: 221 KDVEHVRQRDELLKKVESMKKKLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLK 280

Query: 182 XPIKKQKEE 208
            PI+KQK E
Sbjct: 281 KPIEKQKLE 289



 Score = 43.5 bits (101), Expect(2) = 3e-18
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +1

Query: 199 KRGKGCIRCKM*KVSSRLDSNAKKRFELKEKENQLDVELQGKYKDM 336
           K  K  +  K  K S+R++ N KKR EL+E EN+L V++QGK K+M
Sbjct: 287 KLEKAKLDAKTKKYSTRINDNHKKRVELQETENRLGVQVQGKLKEM 332


>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Cucumis sativus]
          Length = 1053

 Score = 72.8 bits (177), Expect(2) = 3e-18
 Identities = 37/69 (53%), Positives = 43/69 (62%)
 Frame = +2

Query: 2   KDVERVRQRDELLAKAESMKKKVPWLRYDMKQAEYREAKDRXXXXXXXXXXXXXXXXXXX 181
           KDVE VRQRDELL K ESMKKK+PWL+YDMK+AEY E K++                   
Sbjct: 221 KDVEHVRQRDELLKKVESMKKKLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLK 280

Query: 182 XPIKKQKEE 208
            PI+KQK E
Sbjct: 281 KPIEKQKLE 289



 Score = 43.5 bits (101), Expect(2) = 3e-18
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +1

Query: 199 KRGKGCIRCKM*KVSSRLDSNAKKRFELKEKENQLDVELQGKYKDM 336
           K  K  +  K  K S+R++ N KKR EL+E EN+L V++QGK K+M
Sbjct: 287 KLEKAKLDAKTKKYSTRINDNHKKRVELQETENRLGVQVQGKLKEM 332


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
           vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
           product [Vitis vinifera]
          Length = 1051

 Score = 71.6 bits (174), Expect(2) = 6e-18
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +2

Query: 2   KDVERVRQRDELLAKAESMKKKVPWLRYDMKQAEYREAKDRXXXXXXXXXXXXXXXXXXX 181
           KDVERVRQR ELLAK ESMKKK+PWL+YDM++  Y EAK++                   
Sbjct: 219 KDVERVRQRQELLAKVESMKKKLPWLKYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIR 278

Query: 182 XPIKKQKEE 208
            PI+KQ++E
Sbjct: 279 EPIEKQRQE 287



 Score = 43.9 bits (102), Expect(2) = 6e-18
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +1

Query: 199 KRGKGCIRCKM*KVSSRLDSNAKKRFELKEKENQLDVELQGKYKDM 336
           ++ K  +  K  KVS  ++ N+K+R EL EKEN+L V+ +GKY +M
Sbjct: 285 RQEKAALDAKCKKVSGLMNGNSKRRMELLEKENRLGVQARGKYNEM 330


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