BLASTX nr result

ID: Glycyrrhiza23_contig00029087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029087
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   180   9e-44
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   173   1e-41
ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   131   5e-29
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   127   9e-28
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...   111   5e-23

>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/123 (74%), Positives = 103/123 (83%)
 Frame = +1

Query: 16  SKSFIPTKNLFYQISVRRTNDDVRDVGTYEPEVGDLIAFTDIKPKTVHDLDRPTRNYHIA 195
           SKSFI +K L YQISV RT +D  DVG Y+PEVGDLIA TD KPKTV DL+RP R YHIA
Sbjct: 89  SKSFISSKFLLYQISVSRTKNDTEDVGPYQPEVGDLIALTDFKPKTVEDLNRPRRYYHIA 148

Query: 196 YVHRSKESTDKISILSSKCFGMEIESSLRLRSNKAPKLYAVYLLNLTTNIRVWKALNSEL 375
           YV+ SKES+ +ISILSSKC  ME++S+  LRSN APKLYAVYLLNLTTNIR+WKALNSEL
Sbjct: 149 YVYGSKESSGEISILSSKCIDMEVDSNY-LRSNNAPKLYAVYLLNLTTNIRIWKALNSEL 207

Query: 376 EGA 384
           EGA
Sbjct: 208 EGA 210


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score =  173 bits (439), Expect = 1e-41
 Identities = 91/130 (70%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   VERDLSKSFIPTKNLFYQISVRRTNDDVRDVGTYEPEVGDLIAFTDIKPKTVHDL-DRPT 177
           +E + S+SFIPTK+LFYQISV R+++DV   G YEPEVGDLIAFTDIKPKTV DL +RP 
Sbjct: 85  IELERSRSFIPTKSLFYQISVNRSSNDVN--GKYEPEVGDLIAFTDIKPKTVDDLINRPK 142

Query: 178 RNYHIAYVHRSKESTDKISILSSKCFGMEIESSLRLRSNKAPKLYAVYLLNLTTNIRVWK 357
           RNYHI YVH  KES DKISILSSK F M+I+ +LR +S+ APKLYA +LLNLTTN+R+WK
Sbjct: 143 RNYHIGYVHGIKESIDKISILSSKSFDMDIQFALRSKSD-APKLYAFHLLNLTTNVRIWK 201

Query: 358 ALNSELEGAN 387
           AL S+LEGA+
Sbjct: 202 ALKSQLEGAS 211


>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/127 (55%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
 Frame = +1

Query: 10  DLSKSFIPTKNLFYQISVRRTNDDVRDVGTYEPEVGDLIAFTDIKPKTVHDLDRPTRNYH 189
           ++SK F P  +LFY+I+++   D+V  VG YEPEVGDLIAFT+I+P++V DL R  R  H
Sbjct: 80  EISKVFNPPYDLFYKITLKNITDEVYGVGKYEPEVGDLIAFTNIRPRSVDDLSRIKRYCH 139

Query: 190 IAYVHRSK-ESTDKISILSSKCFGMEIESSLRLRSNKAPKLYAVYLLNLTTNIRVWKALN 366
           IAY+H SK E TD+I IL S  F         L+ NKA KLYAV L+N+TTN+R+WKALN
Sbjct: 140 IAYIHGSKDEFTDEIPILLSYEFD--------LKRNKAQKLYAVCLINMTTNVRIWKALN 191

Query: 367 SELEGAN 387
           SE+EG++
Sbjct: 192 SEMEGSD 198


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/127 (51%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
 Frame = +1

Query: 10  DLSKSFIPTKNLFYQISVRRTNDDVRDVGTYEPEVGDLIAFTDIKPKTVHDLDRPTRNYH 189
           ++SK F     LFYQ +++ T ++V  VG YEPEVGDL+AFT+++P++V DL R  R  H
Sbjct: 139 EISKDFNYPHALFYQTTLKNTTEEVYGVGKYEPEVGDLVAFTNVRPRSVSDLSRIERYCH 198

Query: 190 IAYVHRSK-ESTDKISILSSKCFGMEIESSLRLRSNKAPKLYAVYLLNLTTNIRVWKALN 366
           I Y+  SK E  D+I++L SK    E+ +++ LRSNKA KLY VYL+N+TTNIR+W ALN
Sbjct: 199 IGYICGSKDELNDQITMLLSK----EMHNNIDLRSNKAQKLYVVYLINMTTNIRIWNALN 254

Query: 367 SELEGAN 387
           S++E +N
Sbjct: 255 SDMEESN 261


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
 Frame = +1

Query: 13  LSKSFIPTKNLFYQISVRRTNDDVRDVGTYEPEVGDLIAFTDIKPKTVHDLDRPTRNYHI 192
           +SK F P ++LFY+IS++R  D   + G YEPE GDLIAFTD++PK++ DLDRP R Y I
Sbjct: 67  ISKDFKPPRDLFYEISLKRLRDTANEAGIYEPEKGDLIAFTDVRPKSISDLDRPKRPYVI 126

Query: 193 AYVHRS-KESTDKISILSSK---CFGMEIESSLRLRS---NKAPKLYAVYLLNLTTNIRV 351
           A V     E+++K+ ILSSK   CF   +    +  +    K   L+AV+L N+TTNIR+
Sbjct: 127 ALVQGPLGETSNKLPILSSKLIECFEQRMAMDHKRETEADKKKETLFAVFLTNMTTNIRI 186

Query: 352 WKALNSELEGAN 387
           W AL+   E  N
Sbjct: 187 WTALHLGQERGN 198


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