BLASTX nr result

ID: Glycyrrhiza23_contig00029081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029081
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   428   e-118
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...   426   e-117
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   342   4e-92
ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containi...   340   2e-91
ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containi...   339   5e-91

>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 496

 Score =  428 bits (1100), Expect = e-118
 Identities = 212/265 (80%), Positives = 231/265 (87%)
 Frame = +1

Query: 1   PADHAMKLELIIKIYGLTEAEEYFFSIPDSTAKKASCLTLLRGYVRDRDTSKAENFMVKL 180
           PADHAMKLELII+ +GL EAEEYF ++PDS AKKA+CL LLRGYVRDRDTSKAE FM+KL
Sbjct: 98  PADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKL 157

Query: 181 YELGLVVNPHPYNEMMKLFLATCEYRKVPLVIQQMKRNKVPRNVLSYNLWMNXXXXXXXX 360
           YELGLVV+PHP+NEMMKL+L TCEYRKVPLVIQQMKRNK+P NVLSYNLWMN        
Sbjct: 158 YELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGY 217

Query: 361 XXXXXXXXFREMQNDENVELGWSSLATLANVYIKAGQSDKAILVLRNAEKKLSTCNRLGY 540
                   FR+M ND NVE+GW SLATLAN Y KAGQS KAILVL++AEKKLSTCNRLG+
Sbjct: 218 VVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGH 277

Query: 541 FFLITLYASLKEKEGVLRLWDASKAVGGRFSCANYICILTCLVKLGDIEQAKRIFREWES 720
           FFLITLYASLK+KEGVLRLW+ASKAV GR SCANYICILTCLVKLGDI QAKRIF EWES
Sbjct: 278 FFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWES 337

Query: 721 NCRKYDIRVSNVLLGAYVRNGLIEE 795
           NC+KYDIRVSNVLLGAYVRNGL+EE
Sbjct: 338 NCQKYDIRVSNVLLGAYVRNGLMEE 362


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 530

 Score =  426 bits (1095), Expect = e-117
 Identities = 211/265 (79%), Positives = 231/265 (87%)
 Frame = +1

Query: 1   PADHAMKLELIIKIYGLTEAEEYFFSIPDSTAKKASCLTLLRGYVRDRDTSKAENFMVKL 180
           PAD+AMKLELII+ Y L EAEEYF ++PDS AKKA+CLTLLRGY+R RDT+KAE FMVKL
Sbjct: 123 PADYAMKLELIIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKL 182

Query: 181 YELGLVVNPHPYNEMMKLFLATCEYRKVPLVIQQMKRNKVPRNVLSYNLWMNXXXXXXXX 360
           YELGLV++PHP+NEMMKL+LATCEYRKVPLV+QQMKRNKVP NVLSYNLWMN        
Sbjct: 183 YELGLVLSPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGY 242

Query: 361 XXXXXXXXFREMQNDENVELGWSSLATLANVYIKAGQSDKAILVLRNAEKKLSTCNRLGY 540
                   FR+MQND NVE+GWSSLATLAN Y KAGQS KAILVL++AE+KLSTCNRLGY
Sbjct: 243 GVAAVETVFRQMQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGY 302

Query: 541 FFLITLYASLKEKEGVLRLWDASKAVGGRFSCANYICILTCLVKLGDIEQAKRIFREWES 720
           FFLITLYASLKEKEGVLRLW+ASKAVGGR SCANYICIL CLVKLGDI QAKRIF EWES
Sbjct: 303 FFLITLYASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWES 362

Query: 721 NCRKYDIRVSNVLLGAYVRNGLIEE 795
           NC+KYDIRVSNVLLGAY RNG +EE
Sbjct: 363 NCQKYDIRVSNVLLGAYARNGSMEE 387


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  342 bits (878), Expect = 4e-92
 Identities = 169/263 (64%), Positives = 209/263 (79%)
 Frame = +1

Query: 1   PADHAMKLELIIKIYGLTEAEEYFFSIPDSTAKKASCLTLLRGYVRDRDTSKAENFMVKL 180
           P  HA+ +ELI+K+ GL +A EYF  IP S +KKA+ L LL GYV++RD SKAE+FM+KL
Sbjct: 114 PGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKL 173

Query: 181 YELGLVVNPHPYNEMMKLFLATCEYRKVPLVIQQMKRNKVPRNVLSYNLWMNXXXXXXXX 360
              GL+V PHPYNEMMKL++A  +Y KVPLVI +MKRNK+ RNVLSYNLWM         
Sbjct: 174 SSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEV 233

Query: 361 XXXXXXXXFREMQNDENVELGWSSLATLANVYIKAGQSDKAILVLRNAEKKLSTCNRLGY 540
                   ++EM +DENV +GWS+LA+LANVYIKAG  DKA+LVL++AE KLST  RLGY
Sbjct: 234 AKAEMV--YKEMVSDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGY 291

Query: 541 FFLITLYASLKEKEGVLRLWDASKAVGGRFSCANYICILTCLVKLGDIEQAKRIFREWES 720
           FFLITLY+SLK KEGVLRLW+ASKAVGGR  CA+Y+C+++CLVK+GD+  A+++F EWE+
Sbjct: 292 FFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWET 351

Query: 721 NCRKYDIRVSNVLLGAYVRNGLI 789
           NC KYDIRVSNVLLGAYVRNGL+
Sbjct: 352 NCFKYDIRVSNVLLGAYVRNGLM 374


>ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Cucumis sativus]
          Length = 439

 Score =  340 bits (872), Expect = 2e-91
 Identities = 168/265 (63%), Positives = 207/265 (78%)
 Frame = +1

Query: 1   PADHAMKLELIIKIYGLTEAEEYFFSIPDSTAKKASCLTLLRGYVRDRDTSKAENFMVKL 180
           PA+HA++LEL IK +GL +AEEYF  +P   ++KAS L LL GYV++R+T KAE FMVKL
Sbjct: 128 PAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKL 187

Query: 181 YELGLVVNPHPYNEMMKLFLATCEYRKVPLVIQQMKRNKVPRNVLSYNLWMNXXXXXXXX 360
            + GLVVN H YNEMMKL++AT +  KVPLVI+ MK+N++PRNVLSYNLWMN        
Sbjct: 188 RDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGV 247

Query: 361 XXXXXXXXFREMQNDENVELGWSSLATLANVYIKAGQSDKAILVLRNAEKKLSTCNRLGY 540
                   F EM  D+NV++GWS++ TLANVYI+ G  +KA   L+ AEKKLS C RLGY
Sbjct: 248 GSIELV--FEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGY 305

Query: 541 FFLITLYASLKEKEGVLRLWDASKAVGGRFSCANYICILTCLVKLGDIEQAKRIFREWES 720
           FFLITLYASLK+KEGV R+W ASKAV G  +CANYICIL CLVKLG+I++A+++F+EWE 
Sbjct: 306 FFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWEL 365

Query: 721 NCRKYDIRVSNVLLGAYVRNGLIEE 795
           NCR YDIRVSNVLLGAYVRNGL+E+
Sbjct: 366 NCRNYDIRVSNVLLGAYVRNGLLEK 390


>ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Cucumis sativus]
          Length = 439

 Score =  339 bits (869), Expect = 5e-91
 Identities = 168/265 (63%), Positives = 206/265 (77%)
 Frame = +1

Query: 1   PADHAMKLELIIKIYGLTEAEEYFFSIPDSTAKKASCLTLLRGYVRDRDTSKAENFMVKL 180
           PA+HA++LEL IK +GL +AEEYF  +P   ++KAS L LL GYV++R+T KAE FMVKL
Sbjct: 128 PAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKL 187

Query: 181 YELGLVVNPHPYNEMMKLFLATCEYRKVPLVIQQMKRNKVPRNVLSYNLWMNXXXXXXXX 360
            + GLVVN H YNEMMKL++AT +  KVPLVI+ MK+N +PRNVLSYNLWMN        
Sbjct: 188 RDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGV 247

Query: 361 XXXXXXXXFREMQNDENVELGWSSLATLANVYIKAGQSDKAILVLRNAEKKLSTCNRLGY 540
                   F EM  D+NV++GWS++ TLANVYI+ G  +KA   L+ AEKKLS C RLGY
Sbjct: 248 GSIELV--FEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGY 305

Query: 541 FFLITLYASLKEKEGVLRLWDASKAVGGRFSCANYICILTCLVKLGDIEQAKRIFREWES 720
           FFLITLYASLK+KEGV R+W ASKAV G  +CANYICIL CLVKLG+I++A+++F+EWE 
Sbjct: 306 FFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWEL 365

Query: 721 NCRKYDIRVSNVLLGAYVRNGLIEE 795
           NCR YDIRVSNVLLGAYVRNGL+E+
Sbjct: 366 NCRNYDIRVSNVLLGAYVRNGLLEK 390


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