BLASTX nr result

ID: Glycyrrhiza23_contig00029077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029077
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ85127.1| unknown [Medicago truncatula]                          101   5e-20
ref|XP_003532568.1| PREDICTED: U-box domain-containing protein 8...    89   5e-16
ref|XP_003528422.1| PREDICTED: U-box domain-containing protein 8...    85   7e-15
ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8...    67   1e-09
ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8...    65   7e-09

>gb|ACJ85127.1| unknown [Medicago truncatula]
          Length = 289

 Score =  101 bits (252), Expect = 5e-20
 Identities = 63/106 (59%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
 Frame = -3

Query: 304 IPNHALRSLISDYTLLSPLHQIISQPEXXXXXXXXXXXXXXXXXXXLRQLARLSKRDAAF 125
           IPNHALRSLIS YTLL PLHQIISQPE                   LRQLARLSKRDA+F
Sbjct: 60  IPNHALRSLISSYTLLPPLHQIISQPETLISTLILNSSSSDSKIDSLRQLARLSKRDASF 119

Query: 124 RRILADSGAVSAVLSCLDSSAAEPA-----LQEKAXXXXXXXXLDD 2
           RR L DSGAVSAVL CLDSS++  +     LQEKA        LDD
Sbjct: 120 RRRLVDSGAVSAVLFCLDSSSSSSSSGNVKLQEKALSLLLNLSLDD 165


>ref|XP_003532568.1| PREDICTED: U-box domain-containing protein 8-like [Glycine max]
          Length = 366

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 54/101 (53%), Positives = 62/101 (61%)
 Frame = -3

Query: 304 IPNHALRSLISDYTLLSPLHQIISQPEXXXXXXXXXXXXXXXXXXXLRQLARLSKRDAAF 125
           IPNHALRSLIS+YT LSPLHQ ISQPE                   L+ L RLS RD+AF
Sbjct: 60  IPNHALRSLISNYTFLSPLHQTISQPETLISTLTSNSSSSDSKIEALKHLTRLSMRDSAF 119

Query: 124 RRILADSGAVSAVLSCLDSSAAEPALQEKAXXXXXXXXLDD 2
           RR LA+SGAV AVL+ +D    +P+LQEKA        LDD
Sbjct: 120 RRRLAESGAVPAVLAAVD----DPSLQEKALPLLLNLTLDD 156


>ref|XP_003528422.1| PREDICTED: U-box domain-containing protein 8-like [Glycine max]
          Length = 365

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/101 (49%), Positives = 61/101 (60%)
 Frame = -3

Query: 304 IPNHALRSLISDYTLLSPLHQIISQPEXXXXXXXXXXXXXXXXXXXLRQLARLSKRDAAF 125
           IPNHALRSLIS+Y  LSPLH  +SQPE                   L+ L RLSKRD+AF
Sbjct: 60  IPNHALRSLISNYAFLSPLHHTVSQPEALISTLASNSSSSDSKIEALKHLTRLSKRDSAF 119

Query: 124 RRILADSGAVSAVLSCLDSSAAEPALQEKAXXXXXXXXLDD 2
           RR LA+SGAV AV++ +D    +P+LQE+A        LDD
Sbjct: 120 RRRLAESGAVPAVIAAVD----DPSLQERALPLLLNLTLDD 156


>ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8-like [Vitis vinifera]
           gi|359497783|ref|XP_003635641.1| PREDICTED: U-box
           domain-containing protein 8-like [Vitis vinifera]
           gi|147827038|emb|CAN62279.1| hypothetical protein
           VITISV_042771 [Vitis vinifera]
           gi|296084802|emb|CBI25940.3| unnamed protein product
           [Vitis vinifera]
          Length = 363

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
 Frame = -3

Query: 304 IPNHALRSLISDYTLLS-PLHQIISQPEXXXXXXXXXXXXXXXXXXXLRQLARLSKRDAA 128
           IPNHALRSLIS+YTL+S P  Q   +P+                   L QL + SKR+ A
Sbjct: 60  IPNHALRSLISNYTLVSAPKPQPHPEPQTLIATLTSPSSPLHSKLHSLDQLNQFSKRNPA 119

Query: 127 FRRILADSGAVSAVLSCLDSSAAEPALQEKAXXXXXXXXLDD 2
           FRR L +SGAVSAVL+C+ S   + +LQEKA        LDD
Sbjct: 120 FRRRLTESGAVSAVLNCVGSE--DSSLQEKALSLLLNLSLDD 159


>ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus]
          Length = 365

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = -3

Query: 304 IPNHALRSLISDYTLLSPLHQIISQP--EXXXXXXXXXXXXXXXXXXXLRQLARLSKRDA 131
           IPNHALRSLIS++  +S     +  P  +                   L QLAR+SKRD+
Sbjct: 60  IPNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDS 119

Query: 130 AFRRILADSGAVSAVLSCLDSSAAEPALQEKAXXXXXXXXLDD 2
           A RR L +SGAVSAVL C+ S   +P+LQEKA        LDD
Sbjct: 120 AVRRRLTESGAVSAVLKCVGSD--DPSLQEKALSLLLNLSLDD 160


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