BLASTX nr result

ID: Glycyrrhiza23_contig00029044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029044
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   260   1e-67
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   172   3e-41
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   164   6e-39
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   158   6e-37
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]    91   1e-16

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  260 bits (664), Expect = 1e-67
 Identities = 132/177 (74%), Positives = 145/177 (81%)
 Frame = -3

Query: 531  VVSSGHLAGPVDVSLDNELTPFSFSVCQRLTELPQNLDSLVNTEIPKSSPKTNVQDFRDE 352
            V S GHL+ PVDVSL NEL PFSFSVCQRL ++PQ  D LV TEIPKSSP+    DF D+
Sbjct: 828  VSSGGHLSCPVDVSLSNELRPFSFSVCQRLAKVPQGPDLLVTTEIPKSSPRAIAPDFCDD 887

Query: 351  NMETTPAYNTMDECSHADFKLESKFIYSSPLMETDMVQNLWRKLHDCQTDLREHATSEEI 172
            +ME    YN MDECSH+DFKLESKF+ SSP ME D VQN+WRKL   +TDL++HA SE+I
Sbjct: 888  SMEIATVYNPMDECSHSDFKLESKFVDSSPSMEIDTVQNVWRKL---RTDLKQHAKSEQI 944

Query: 171  GAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPSIFLSDEATFSWYDEQMMMST 1
            GAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEP   LSDE TFSWYDEQMMMST
Sbjct: 945  GAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPPTSLSDEDTFSWYDEQMMMST 1001


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  172 bits (436), Expect = 3e-41
 Identities = 100/180 (55%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
 Frame = -3

Query: 534  GVVSSGHLAGPVD--VSLDNELTPFSFSVCQRLTELPQNLDSLVNTEIPKSSPKTNVQDF 361
            G VSSG L GP D  VS++NEL PF   V +RLT+L QN D L++TEI   SPK  +QD 
Sbjct: 870  GAVSSGPLVGPQDQEVSVNNELKPFC--VRRRLTKLSQNPD-LLDTEISDHSPKGVLQDV 926

Query: 360  RDENMETTPAYNTMDECSHADFKLESKFIYSSPLMETDMVQNLWRKLHDCQTDLREHATS 181
             DE++ET    N MDECS  DFK +  F+ S+PL ET+ +Q LW+ L + + DL++HATS
Sbjct: 927  LDEHIETI--VNVMDECSRVDFKAKPMFLQSNPLTETEKIQKLWKDLRERRMDLKQHATS 984

Query: 180  EEIGAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPSIFLSDEATFSWYDEQMMMST 1
            E++GA +VVKLASGL+NLISEADL  +        IMEPS FLS EAT SWY EQ+M ST
Sbjct: 985  EQLGAFQVVKLASGLNNLISEADLFHKR------DIMEPSTFLSGEATSSWYHEQIMTST 1038


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  164 bits (416), Expect = 6e-39
 Identities = 97/176 (55%), Positives = 121/176 (68%)
 Frame = -3

Query: 528  VSSGHLAGPVDVSLDNELTPFSFSVCQRLTELPQNLDSLVNTEIPKSSPKTNVQDFRDEN 349
            VSSG L GP +VS+ NEL PF+FSV + LT+L QNLD L++TEI   S K   QD  DE+
Sbjct: 876  VSSGPLFGPQEVSVYNELKPFTFSVPRHLTKLSQNLD-LLDTEISDHSCKGVQQDVLDEH 934

Query: 348  METTPAYNTMDECSHADFKLESKFIYSSPLMETDMVQNLWRKLHDCQTDLREHATSEEIG 169
            MET    N MDECS  DFKL+   + S+   ET+ +Q LW  L +C+ DLR+HATSE++G
Sbjct: 935  METI--VNVMDECSRVDFKLKPTCLQSNSFAETEKIQKLWGDLLECRMDLRQHATSEQLG 992

Query: 168  AIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPSIFLSDEATFSWYDEQMMMST 1
            A +VV+LASGL+NLISEADL    H++    IMEPS FLS E T   Y EQ+M ST
Sbjct: 993  AFQVVRLASGLNNLISEADLF---HER---DIMEPSAFLSGETTSIRYHEQIMTST 1042


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  158 bits (399), Expect = 6e-37
 Identities = 92/178 (51%), Positives = 120/178 (67%)
 Frame = -3

Query: 534  GVVSSGHLAGPVDVSLDNELTPFSFSVCQRLTELPQNLDSLVNTEIPKSSPKTNVQDFRD 355
            GVVS GH    ++ S++NEL P +FSV +RL++L +N D L++TEIP+            
Sbjct: 953  GVVSYGHC---LEASMNNELKPLTFSVRRRLSKLSENSDMLMDTEIPE------------ 997

Query: 354  ENMETTPAYNTMDECSHADFKLESKFIYSSPLMETDMVQNLWRKLHDCQTDLREHATSEE 175
                 T     MDECS  DFKL+S F+ SSP +ETDMVQNLW+KL   Q DL++H  SE+
Sbjct: 998  -----TTIIKVMDECSRVDFKLKSTFVESSPSLETDMVQNLWKKLR--QMDLKQHTISEQ 1050

Query: 174  IGAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPSIFLSDEATFSWYDEQMMMST 1
            +GA +VVKLASGLSNLISEAD LF N+Q K   I+EP  F+S+EAT S Y+++ M ST
Sbjct: 1051 LGASQVVKLASGLSNLISEAD-LFHNYQHKH-DILEPQSFVSNEATTSSYNDETMTST 1106


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
 Frame = -3

Query: 528  VSSGHLAGPVD-VSLDNELTPFSFSVCQRLTE-----LPQNLDSLVNTEIPKSSPKTNVQ 367
            +S G +A   + VS+ N+LT     V  +  E     L QNL++++N +    S    V 
Sbjct: 819  LSCGRVADIAETVSICNDLTQNLLQVEAKNPEKSVPGLSQNLETMINGD----SVNEEVG 874

Query: 366  DFRDENMET-TPAYNTMDECSHADFKLESKFIYSS-PLMETDMVQNLWRKLHDCQTDLRE 193
            D ++E++E+ T  Y  MDECS   F + SK +      M T+ VQ  WRKL  C TDLR 
Sbjct: 875  DSQNEHVESVTREYPVMDECSRMAFTIGSKSLEDPRSWMVTNSVQETWRKLRGCHTDLRR 934

Query: 192  HATSEEIGAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPSIFLSDEAT--FSWYDE 19
            +A  E+  A ++V+L   +SNLISEAD L  N        ++ S     E +  FSWYDE
Sbjct: 935  YAILEQRDASQIVELTYKMSNLISEADQLRYNCHPLDSDSLDLSAVPCGEESHAFSWYDE 994

Query: 18   QMMMST 1
            Q+ M++
Sbjct: 995  QLQMAS 1000


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