BLASTX nr result

ID: Glycyrrhiza23_contig00029026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029026
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...   184   7e-45
ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816...   136   2e-30
ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...   132   4e-29
ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...   121   8e-26

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
           gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
           factor fip1 [Medicago truncatula]
          Length = 1110

 Score =  184 bits (467), Expect = 7e-45
 Identities = 103/183 (56%), Positives = 116/183 (63%), Gaps = 21/183 (11%)
 Frame = -2

Query: 513 DDGLNIVLNDEDPRGVSVGRDEDVHGDGL-GKHGECVDQSKGGSELVSSDAH-GCRSKNA 340
           +DGLNIVLND+D     V  ++ VH +GL     EC+DQ +   + VSSDAH G  SK  
Sbjct: 63  EDGLNIVLNDDDCPIPCV--EDVVHREGLENNQEECIDQEQ---QFVSSDAHCGQSSKIC 117

Query: 339 VKGGYGSQFFRPKFMRTQGSMFVNNMKAG-------------------VQNQRSSSSYFD 217
           V+GGYGSQFFR KFM+TQGSMFVNNM A                     QN +S+SSYF 
Sbjct: 118 VRGGYGSQFFRSKFMKTQGSMFVNNMMANKSTLLTKDCSSFTQGRGDSFQNHKSTSSYFA 177

Query: 216 GTCDATNAMVVRHGSFLPWHWNIYDVNIDKLEEKPWRIPGVDITDYFNFGFNENTWKEYC 37
           G             SFLPWHW IYDVNIDK EEKPWRIPG DITDYFNFG NENTWK+YC
Sbjct: 178 G-------------SFLPWHWKIYDVNIDKFEEKPWRIPGADITDYFNFGLNENTWKQYC 224

Query: 36  MSL 28
            SL
Sbjct: 225 SSL 227


>ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816396 [Glycine max]
          Length = 1121

 Score =  136 bits (342), Expect = 2e-30
 Identities = 84/199 (42%), Positives = 103/199 (51%), Gaps = 24/199 (12%)
 Frame = -2

Query: 525 TDSDDDGLNIVLNDEDPRGVSVGRDEDVHGDGLGKHGECVDQSKGGSELVSSDAHGCRSK 346
           +  DDDGL IVLNDED   + VG D     +G G +G+                      
Sbjct: 63  SSDDDDGLKIVLNDED---IPVGAD--ARDEGNGDNGD---------------------- 95

Query: 345 NAVKGGYGSQFFRPKFMRTQGSMFVNNMKAG----------------------VQNQRSS 232
                  GS+FF PK  R++G   +NNMKA                       +QN   S
Sbjct: 96  ----DNNGSRFFHPKTGRSRGLAILNNMKANASMGMASYISSLNKGRRNGDACIQNLALS 151

Query: 231 SSYFDGTCDATNAMVVR--HGSFLPWHWNIYDVNIDKLEEKPWRIPGVDITDYFNFGFNE 58
           SS     C A N M V+  +GS LPW+W I+DVN D L EK W++PGVDITDYFNFGFNE
Sbjct: 152 SSR---VCLAANPMAVQCGYGSALPWYWGIFDVNTDTLTEKLWKVPGVDITDYFNFGFNE 208

Query: 57  NTWKEYCMSLGQLWQTSVQ 1
           +TWK YC SL QLW+TS+Q
Sbjct: 209 STWKLYCSSLEQLWRTSLQ 227


>ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|222865082|gb|EEF02213.1|
           predicted protein [Populus trichocarpa]
          Length = 1253

 Score =  133 bits (334), Expect = 2e-29
 Identities = 86/198 (43%), Positives = 114/198 (57%), Gaps = 24/198 (12%)
 Frame = -2

Query: 528 GTDSDDDGLNIVLNDEDPRGVSVGRDEDVHGDGLGKHGECVDQSKGGSELVSSDAHGCR- 352
           G+DS+DD LNIVLNDED +G  VGR  + +G+G G   E  ++ +GG  + + +   C  
Sbjct: 81  GSDSEDD-LNIVLNDEDCKGFEVGRARNGNGNGGGGFEE--EEGEGGGFVGAKNGVECNA 137

Query: 351 SKNAVKGGYGSQFFRPKFMRTQGSMFVNNMK----AGVQNQRSSSS---YFDGTCD---- 205
           S N VKG +       K +R  GS F +N K    AGV  + SSS+   + D  C     
Sbjct: 138 SGNGVKGIHHLPHLHYKNVRPYGSSFPSNKKGNESAGVAFRSSSSARGNWEDNRCKQHKV 197

Query: 204 ---------ATNAMVVRHGSF---LPWHWNIYDVNIDKLEEKPWRIPGVDITDYFNFGFN 61
                    AT   V+ HG +   LPW+ +I DVNID  EEK WR PGVDI+++FNFGFN
Sbjct: 198 NSGRVANFHATTNSVLSHGGYGYSLPWYRSILDVNIDAFEEKQWRYPGVDISNFFNFGFN 257

Query: 60  ENTWKEYCMSLGQLWQTS 7
           E++WK+YCMSL Q  Q S
Sbjct: 258 EDSWKQYCMSLEQYGQQS 275


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score =  132 bits (331), Expect = 4e-29
 Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 21/196 (10%)
 Frame = -2

Query: 525 TDSDDDGLNIVLNDEDPRGVSVGRDEDVHGDGLGKHGECVDQSKGGSELVSSDAHGCRSK 346
           +D DDD L IVLNDED   + VG D     DG G +G+                      
Sbjct: 60  SDDDDDDLKIVLNDED---IPVGADA-CDDDGDGDNGD---------------------- 93

Query: 345 NAVKGGYGSQFFRPKFMRTQGSMFVNNMKAGV------------QNQRSSSSYFDG---- 214
                  GS+FF PK  R++G   +NN KA              + +R+  +Y       
Sbjct: 94  ----DNNGSRFFHPKSGRSRGLAILNNTKANASMGMGSYISSLNKGRRNGDTYIQNLALS 149

Query: 213 ---TCDATNAMVVR--HGSFLPWHWNIYDVNIDKLEEKPWRIPGVDITDYFNFGFNENTW 49
               C A N M V+  +G  LPW+W I+DVNID L EKPW++PGVDITDYFNFGFNE++W
Sbjct: 150 SSRVCLAENPMAVQCGYGLALPWYWGIFDVNIDTLTEKPWKVPGVDITDYFNFGFNESSW 209

Query: 48  KEYCMSLGQLWQTSVQ 1
           K Y  SL QLW+TS+Q
Sbjct: 210 KLYRASLEQLWRTSLQ 225


>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
           gi|296083247|emb|CBI22883.3| unnamed protein product
           [Vitis vinifera]
          Length = 1300

 Score =  121 bits (303), Expect = 8e-26
 Identities = 75/193 (38%), Positives = 97/193 (50%), Gaps = 24/193 (12%)
 Frame = -2

Query: 528 GTDSDDDGLNIVLNDEDPRGVSVGRDEDVHGDGLGKHGECVDQSKGGSELVSSDAHGCRS 349
           G+DS+DD  NIVLNDED +   V     V G   G+ G+ ++Q   G E           
Sbjct: 74  GSDSEDD-FNIVLNDEDGQRFPVRSGVGVLGGSDGEDGDGMEQGFAGGE----------R 122

Query: 348 KNAVKGGYGSQFFRPKFMRTQGSMFVNNMKA---------------------GVQNQRSS 232
            N  K GY  QF + K++R+  ++F +N KA                     G    + S
Sbjct: 123 GNGAKSGYHLQFSQYKYIRSHSTVFPSNAKANGTAKVASFSSMLARGDWEENGSNQHKGS 182

Query: 231 SSYFDGTCDATNAMVVRHGSF---LPWHWNIYDVNIDKLEEKPWRIPGVDITDYFNFGFN 61
           SS    +     A +V  G +   LPW+  I DVNID  E+KPWR PGVD+TD+FNFGFN
Sbjct: 183 SSVEIASTHTRAAPLVAQGGYGFSLPWYRTILDVNIDTFEQKPWRHPGVDLTDFFNFGFN 242

Query: 60  ENTWKEYCMSLGQ 22
           E TWK YC SL Q
Sbjct: 243 EETWKNYCNSLEQ 255


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