BLASTX nr result

ID: Glycyrrhiza23_contig00029023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029023
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555197.1| PREDICTED: transmembrane protein 53-like [Gl...   112   2e-23
ref|XP_003536745.1| PREDICTED: transmembrane protein 53-like [Gl...   110   9e-23
gb|ACU18689.1| unknown [Glycine max]                                  110   2e-22
ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...    85   5e-15
ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003555197.1| PREDICTED: transmembrane protein 53-like [Glycine max]
          Length = 438

 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
 Frame = -3

Query: 272 GAIQRPLXXXXXXXXASIS---SDKLPFHGSSGDCSTSNLTHSLPCNSLQQSDSSWVSHI 102
           GAIQRPL        AS S   SDKLP    S DCSTS+L HS PC+++Q+SDSSWVSHI
Sbjct: 6   GAIQRPLVAAAAVAVASFSADLSDKLP----SRDCSTSDLAHSTPCSNIQESDSSWVSHI 61

Query: 101 SASKLANLSFVTQIRVPLPNVQFRVPNLGHN 9
           S SKLANLSFVTQI VP+PNVQFRVP+LG N
Sbjct: 62  SDSKLANLSFVTQIPVPVPNVQFRVPSLGQN 92


>ref|XP_003536745.1| PREDICTED: transmembrane protein 53-like [Glycine max]
          Length = 435

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
 Frame = -3

Query: 272 GAIQRPLXXXXXXXXASIS---SDKLPFHGSSGDCSTSNLTHSLPCNSLQQSDSSWVSHI 102
           GAIQRPL        AS S   SDKLP    S DCSTS+L HS PC++ Q+SDSSWVSHI
Sbjct: 6   GAIQRPLVAAAAVAVASFSADLSDKLP----SRDCSTSDLAHSTPCSNTQKSDSSWVSHI 61

Query: 101 SASKLANLSFVTQIRVPLPNVQFRVPNLGHN 9
           S SKLANLSFVT+I VP+P+VQFRVP+LGHN
Sbjct: 62  SDSKLANLSFVTRIPVPVPHVQFRVPSLGHN 92


>gb|ACU18689.1| unknown [Glycine max]
          Length = 250

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/91 (67%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = -3

Query: 272 GAIQRPLXXXXXXXXASIS---SDKLPFHGSSGDCSTSNLTHSLPCNSLQQSDSSWVSHI 102
           GAIQ PL        AS S   SDKLP    S DCSTS+L HS PC+++Q+SDSSWVSHI
Sbjct: 6   GAIQGPLVAAAAVAVASFSADLSDKLP----SRDCSTSDLAHSTPCSNIQESDSSWVSHI 61

Query: 101 SASKLANLSFVTQIRVPLPNVQFRVPNLGHN 9
           S SKLANLSFVTQI VP+PNVQFRVP+LG N
Sbjct: 62  SDSKLANLSFVTQIPVPVPNVQFRVPSLGQN 92


>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/81 (55%), Positives = 53/81 (65%)
 Frame = -3

Query: 263 QRPLXXXXXXXXASISSDKLPFHGSSGDCSTSNLTHSLPCNSLQQSDSSWVSHISASKLA 84
           QRP+        AS++ DKLP   S+  CSTSN   S   NS+Q+S  SWVSHIS SKL 
Sbjct: 9   QRPIAAAAAVAVASLAPDKLPSRKSNDSCSTSNRLDSSLSNSVQESSFSWVSHISVSKLT 68

Query: 83  NLSFVTQIRVPLPNVQFRVPN 21
           NLSFVT+IRVP+PN  F V N
Sbjct: 69  NLSFVTRIRVPVPNTNFLVSN 89


>ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|222855820|gb|EEE93367.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = -3

Query: 272 GAIQRPLXXXXXXXXASIS---SDKLPFHGSSGDCSTSNLTHSLPCNSLQQSDSSWVSHI 102
           G +QRP+        AS+S   SDKL    S   CSTS  + SL  NS+Q S+ SWVSH 
Sbjct: 6   GMLQRPVIAAAAAALASVSVDFSDKLQSFRSFDSCSTSEQSSSLLSNSVQDSNFSWVSHS 65

Query: 101 SASKLANLSFVTQIRVPLPNVQFRVPNLGHN 9
           S SKLA+ SFVT+I++P+P + F V ++  N
Sbjct: 66  SVSKLASSSFVTRIQIPVPKLNFAVLDVSQN 96


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