BLASTX nr result

ID: Glycyrrhiza23_contig00029020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029020
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545221.1| PREDICTED: putative methyltransferase NSUN6-...   187   8e-46
ref|XP_003617396.1| Ribosomal RNA small subunit methyltransferas...   176   2e-42
ref|XP_004162289.1| PREDICTED: LOW QUALITY PROTEIN: putative met...   150   1e-34
ref|XP_002279096.2| PREDICTED: putative methyltransferase NSUN6-...   148   5e-34
ref|XP_004144679.1| PREDICTED: putative methyltransferase NSUN6-...   147   1e-33

>ref|XP_003545221.1| PREDICTED: putative methyltransferase NSUN6-like [Glycine max]
          Length = 571

 Score =  187 bits (475), Expect = 8e-46
 Identities = 99/125 (79%), Positives = 102/125 (81%), Gaps = 2/125 (1%)
 Frame = +2

Query: 5   KLSSLVKKQS--SNATDSVDDVANPLKEECLDPGAGPVSKCRIPGLDYVVFVWGSGPHRI 178
           KL SLV         +DS DDVANPLKE C    A P+SKC IPGLDYVVFVWGSGP RI
Sbjct: 66  KLRSLVPNADVPPPQSDSGDDVANPLKE-CSAAAAAPISKCEIPGLDYVVFVWGSGPRRI 124

Query: 179 DYGDLPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSLAVEKQQGPDGGW 358
            YGD PPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVS+AVEK QG DGGW
Sbjct: 125 HYGDAPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSVAVEK-QGADGGW 183

Query: 359 GIAMT 373
           GIAMT
Sbjct: 184 GIAMT 188


>ref|XP_003617396.1| Ribosomal RNA small subunit methyltransferase B [Medicago
           truncatula] gi|355518731|gb|AET00355.1| Ribosomal RNA
           small subunit methyltransferase B [Medicago truncatula]
          Length = 572

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/125 (71%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   EKLSSLVK-KQSSNATDSVDDVANPLKEECLDPGAGPVSKCRIPGLDYVVFVWGSGPHRI 178
           EKL S VK K + +  + VDD  NPLKE+ LD  +  + KC+IPGLDYVVFVWGSGPH +
Sbjct: 69  EKLRSTVKEKLNGSDCEDVDDAVNPLKED-LDSDSSLLFKCKIPGLDYVVFVWGSGPHHV 127

Query: 179 DYGDLPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSLAVEKQQGPDGGW 358
           DYG++ PKEVIVSRKCAEAVLRGAQVYVPG+MACSAHVEKGDTVAVS+A+E QQG DGGW
Sbjct: 128 DYGNVAPKEVIVSRKCAEAVLRGAQVYVPGIMACSAHVEKGDTVAVSVAIE-QQGSDGGW 186

Query: 359 GIAMT 373
              MT
Sbjct: 187 SSGMT 191


>ref|XP_004162289.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
           NSUN6-like [Cucumis sativus]
          Length = 559

 Score =  150 bits (378), Expect = 1e-34
 Identities = 80/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   EKLSSLVKKQSSNATDSVDDVANPLKEECLDPGAGPVSKCRIPGLDYVVFVWGSGPHRID 181
           EKLS++VK+   + +++      P+ E+   P    +S+C++PGLDYVVFV GSGPH ID
Sbjct: 67  EKLSTIVKEMGCSNSEN-----KPVTEKFQHPS---ISRCQVPGLDYVVFVRGSGPHTID 118

Query: 182 YG---DLPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSLAVEKQQGPDG 352
           YG     PPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGD VAVS+AVE Q+G DG
Sbjct: 119 YGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDAVAVSVAVE-QRGVDG 177

Query: 353 GWGIAMT 373
           GW + +T
Sbjct: 178 GWSLGIT 184


>ref|XP_002279096.2| PREDICTED: putative methyltransferase NSUN6-like [Vitis vinifera]
          Length = 590

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/108 (68%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
 Frame = +2

Query: 59  DVANPLKEECLDPGAGPVSKCRIPGLDYVVFVWGSGPHRIDYG---DLPPKEVIVSRKCA 229
           ++ N L  +      G +SKC++PGLDYVVFV GSGPH I+YG   D PPKEVIVSRKCA
Sbjct: 97  ELGNTLDSQKKSLETGSISKCQLPGLDYVVFVRGSGPHTIEYGYEIDRPPKEVIVSRKCA 156

Query: 230 EAVLRGAQVYVPGVMACSAHVEKGDTVAVSLAVEKQQGPDGGWGIAMT 373
           EAVLRGAQVYVPGV+ACS+HVEKGD VAVS+AVE Q G DGGWG+ +T
Sbjct: 157 EAVLRGAQVYVPGVLACSSHVEKGDVVAVSVAVE-QPGTDGGWGVGIT 203


>ref|XP_004144679.1| PREDICTED: putative methyltransferase NSUN6-like [Cucumis sativus]
          Length = 556

 Score =  147 bits (370), Expect = 1e-33
 Identities = 80/127 (62%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   EKLSSLVKKQSSNATDSVDDVANPLKEECLDPGAGPVSKCRIPGLDYVVFVWGSGPHRID 181
           EKLS++VK+              P+ E+   P    +S+C++PGLDYVVFV GSGPH ID
Sbjct: 67  EKLSTIVKEMGYEK--------KPVTEKFQHPS---ISRCQVPGLDYVVFVRGSGPHTID 115

Query: 182 YG---DLPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSLAVEKQQGPDG 352
           YG     PPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGD VAVS+AVE Q+G DG
Sbjct: 116 YGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDAVAVSVAVE-QRGVDG 174

Query: 353 GWGIAMT 373
           GW + +T
Sbjct: 175 GWSLGIT 181


Top