BLASTX nr result

ID: Glycyrrhiza23_contig00029007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00029007
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU19071.1| unknown [Glycine max]                                  258   4e-67
ref|XP_003616150.1| Protein SET DOMAIN GROUP [Medicago truncatul...   244   8e-63
ref|XP_003544959.1| PREDICTED: protein SET DOMAIN GROUP 40-like ...   239   2e-61
ref|XP_003518360.1| PREDICTED: LOW QUALITY PROTEIN: protein SET ...   233   1e-59
ref|XP_002305239.1| SET domain protein [Populus trichocarpa] gi|...   209   3e-52

>gb|ACU19071.1| unknown [Glycine max]
          Length = 497

 Score =  258 bits (659), Expect = 4e-67
 Identities = 123/146 (84%), Positives = 133/146 (91%), Gaps = 4/146 (2%)
 Frame = -2

Query: 428 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEQSGVENVDHLLSNSSIHVSALSNGDG--- 258
           ISSRTLHIPWDEAGCLCPVGDLFNYDAPG E SG+E++D LLSN+SI  + + NGD    
Sbjct: 193 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGIEPSGIEDLDRLLSNTSIPDTIVLNGDKNIV 252

Query: 257 -DAEQVDSHSRRLTDGGFDEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQ 81
            DAEQ+DSHS RLTDGGF+EDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQ
Sbjct: 253 VDAEQLDSHSWRLTDGGFEEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQ 312

Query: 80  ENPNDKIFIPLEPAVYSSTSWSKESL 3
           ENPNDK+FIPLEPA+YSSTSWSKESL
Sbjct: 313 ENPNDKVFIPLEPALYSSTSWSKESL 338


>ref|XP_003616150.1| Protein SET DOMAIN GROUP [Medicago truncatula]
           gi|355517485|gb|AES99108.1| Protein SET DOMAIN GROUP
           [Medicago truncatula]
          Length = 532

 Score =  244 bits (622), Expect = 8e-63
 Identities = 116/142 (81%), Positives = 126/142 (88%)
 Frame = -2

Query: 428 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEQSGVENVDHLLSNSSIHVSALSNGDGDAE 249
           ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEE SGVE+VDH LSN  ++V        D  
Sbjct: 238 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEELSGVEDVDHFLSNGDMNVVI------DEG 291

Query: 248 QVDSHSRRLTDGGFDEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPN 69
           Q+D +S+RLTDGGF+EDANAYCFYAR +YKKGDQVLLCYGTYTNLELLEHYGFLLQENPN
Sbjct: 292 QIDFNSQRLTDGGFEEDANAYCFYARTNYKKGDQVLLCYGTYTNLELLEHYGFLLQENPN 351

Query: 68  DKIFIPLEPAVYSSTSWSKESL 3
           DKIFIPLEPA+Y+STSWSKESL
Sbjct: 352 DKIFIPLEPAMYTSTSWSKESL 373


>ref|XP_003544959.1| PREDICTED: protein SET DOMAIN GROUP 40-like [Glycine max]
          Length = 475

 Score =  239 bits (610), Expect = 2e-61
 Identities = 114/142 (80%), Positives = 121/142 (85%)
 Frame = -2

Query: 428 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEQSGVENVDHLLSNSSIHVSALSNGDGDAE 249
           ISSRTLHIPWDEAGCLCPVGDLFNYDAPG E SG+E++DH                  AE
Sbjct: 193 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGIEPSGIEDLDH------------------AE 234

Query: 248 QVDSHSRRLTDGGFDEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPN 69
           Q+DSHS RLTDGGF+EDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPN
Sbjct: 235 QLDSHSWRLTDGGFEEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPN 294

Query: 68  DKIFIPLEPAVYSSTSWSKESL 3
           DK+FIPLEPA+YSSTSWSKESL
Sbjct: 295 DKVFIPLEPALYSSTSWSKESL 316


>ref|XP_003518360.1| PREDICTED: LOW QUALITY PROTEIN: protein SET DOMAIN GROUP 40-like
           [Glycine max]
          Length = 497

 Score =  233 bits (594), Expect = 1e-59
 Identities = 109/144 (75%), Positives = 125/144 (86%), Gaps = 2/144 (1%)
 Frame = -2

Query: 428 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEQSGVENVDHLLSNSSIHVSALSNGDGDAE 249
           ISS+T+HIPWDEAGCLC VGDLFNYDAPG E SG+E+++H LSNSSIH ++L NGD +  
Sbjct: 205 ISSQTMHIPWDEAGCLCLVGDLFNYDAPGMEPSGIEDLEHFLSNSSIHDTSLLNGDNNIM 264

Query: 248 QVDSH--SRRLTDGGFDEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQEN 75
              +   ++RLTDG F+ED NAYCFY+R HYKKGDQVLLCYG YTNLEL+EHYGFLLQEN
Sbjct: 265 MQTTLILTQRLTDGWFEEDVNAYCFYSRAHYKKGDQVLLCYGIYTNLELVEHYGFLLQEN 324

Query: 74  PNDKIFIPLEPAVYSSTSWSKESL 3
           PNDK+FIPLEPAVYSSTSWSKESL
Sbjct: 325 PNDKVFIPLEPAVYSSTSWSKESL 348


>ref|XP_002305239.1| SET domain protein [Populus trichocarpa]
           gi|222848203|gb|EEE85750.1| SET domain protein [Populus
           trichocarpa]
          Length = 518

 Score =  209 bits (531), Expect = 3e-52
 Identities = 102/146 (69%), Positives = 116/146 (79%), Gaps = 4/146 (2%)
 Frame = -2

Query: 428 ISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEQSGVENVDHLLSNSSIHVSALSNG----D 261
           ISSR LHIPWDEAGCLCPVGDLFNY APGEE + +ENV H ++ SS+  S+LSNG    D
Sbjct: 207 ISSRALHIPWDEAGCLCPVGDLFNYAAPGEESNDLENVVHWMNASSLEDSSLSNGETTDD 266

Query: 260 GDAEQVDSHSRRLTDGGFDEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQ 81
              +Q D    RLTDGGFDE+  AYCFYAR++YKKG QVLL YGTYTNLELLEHYGFLL 
Sbjct: 267 FIGDQPDIGLERLTDGGFDENMAAYCFYARKNYKKGTQVLLGYGTYTNLELLEHYGFLLN 326

Query: 80  ENPNDKIFIPLEPAVYSSTSWSKESL 3
           ENPNDK+FIPLEP++YS  SW K S+
Sbjct: 327 ENPNDKVFIPLEPSMYSFISWPKVSM 352


Top