BLASTX nr result

ID: Glycyrrhiza23_contig00028993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028993
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807...   239   1e-61
ref|XP_003626275.1| DNA polymerase [Medicago truncatula] gi|3555...   234   5e-60
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   234   7e-60
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   231   5e-59
ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|2...   218   4e-55

>ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807006 [Glycine max]
          Length = 846

 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/145 (77%), Positives = 116/145 (80%)
 Frame = +3

Query: 3   LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLTXXXXXXXXXXXXXXXXXXXXXXGRDDVEM 182
           LLKQKSVKTVVRKLLHEVVKLSSVPIDPNL                       GRDDVEM
Sbjct: 283 LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPPPKRRVGRDDVEM 342

Query: 183 KKGDWLCAKCDFMNFAKNTTCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 362
           KKGDWLC KC+FMNFAKNT CLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK
Sbjct: 343 KKGDWLCPKCEFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 402

Query: 363 RPPDEFLENKMQDKKHSSRPNFDKM 437
           RPPDEFLENKMQD+  SS+P  DKM
Sbjct: 403 RPPDEFLENKMQDRIQSSKPKLDKM 427


>ref|XP_003626275.1| DNA polymerase [Medicago truncatula] gi|355501290|gb|AES82493.1|
           DNA polymerase [Medicago truncatula]
          Length = 886

 Score =  234 bits (597), Expect = 5e-60
 Identities = 110/145 (75%), Positives = 115/145 (79%)
 Frame = +3

Query: 3   LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLTXXXXXXXXXXXXXXXXXXXXXXGRDDVEM 182
           LLKQKSVK VVRKLLHEVVKLSSVPIDPNL                       GRDDVEM
Sbjct: 286 LLKQKSVKAVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPTPKRRVGRDDVEM 345

Query: 183 KKGDWLCAKCDFMNFAKNTTCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 362
           K+GDWLC KCDFMNFAKN  CLQCDAKRPKRQLLPGEWEC ECNFLNYRRN+VCFHCECK
Sbjct: 346 KRGDWLCPKCDFMNFAKNNVCLQCDAKRPKRQLLPGEWECTECNFLNYRRNVVCFHCECK 405

Query: 363 RPPDEFLENKMQDKKHSSRPNFDKM 437
           RPPDEFLENK QD+K+SS PNF+KM
Sbjct: 406 RPPDEFLENKTQDRKYSSGPNFNKM 430


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  234 bits (596), Expect = 7e-60
 Identities = 109/144 (75%), Positives = 115/144 (79%)
 Frame = +3

Query: 3    LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLTXXXXXXXXXXXXXXXXXXXXXXGRDDVEM 182
            LLKQKSVKTVVRKLLHEVVKLSSVPIDPNL                       GRDDVEM
Sbjct: 2228 LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPPPKRRVGRDDVEM 2287

Query: 183  KKGDWLCAKCDFMNFAKNTTCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 362
            K+GDWLC KC+FMNFAKNT CLQCDAKRPKRQLLPGEWECP+CNFLNYRRNMVCFHCECK
Sbjct: 2288 KRGDWLCPKCEFMNFAKNTVCLQCDAKRPKRQLLPGEWECPKCNFLNYRRNMVCFHCECK 2347

Query: 363  RPPDEFLENKMQDKKHSSRPNFDK 434
            RPPDEFLENKMQD+  +S+P  DK
Sbjct: 2348 RPPDEFLENKMQDRIQNSKPKLDK 2371


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  231 bits (589), Expect = 5e-59
 Identities = 105/144 (72%), Positives = 114/144 (79%)
 Frame = +3

Query: 3    LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLTXXXXXXXXXXXXXXXXXXXXXXGRDDVEM 182
            LLKQKS+KTVVRKLLHEVVKLS+VPIDPNL                       GRDDVEM
Sbjct: 1512 LLKQKSLKTVVRKLLHEVVKLSAVPIDPNLPPPVIKKPPPKVKQPPPTPKRRVGRDDVEM 1571

Query: 183  KKGDWLCAKCDFMNFAKNTTCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 362
            KKGDWLC KCDFMNFAKNT CLQCDAKRPKRQLLPGEWECPECNFLNYRRNM CFHC+CK
Sbjct: 1572 KKGDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCDCK 1631

Query: 363  RPPDEFLENKMQDKKHSSRPNFDK 434
            RPPDEF+ENKM+D++H  +P  +K
Sbjct: 1632 RPPDEFIENKMEDRQHVHKPRLEK 1655


>ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|222838279|gb|EEE76644.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  218 bits (555), Expect = 4e-55
 Identities = 98/145 (67%), Positives = 110/145 (75%)
 Frame = +3

Query: 3   LLKQKSVKTVVRKLLHEVVKLSSVPIDPNLTXXXXXXXXXXXXXXXXXXXXXXGRDDVEM 182
           LLKQK V+TVVRKLLHEV KLS+VPIDPNL                       GRD ++M
Sbjct: 318 LLKQKPVRTVVRKLLHEVAKLSAVPIDPNLPPPVIKRPPTKVKQPPTPPRKLVGRDGIDM 377

Query: 183 KKGDWLCAKCDFMNFAKNTTCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECK 362
           KKGDWLC KCDFMNFAKN  CLQCDAKRPKRQLLPGEWECPECNFLNYRRNM CFHC+CK
Sbjct: 378 KKGDWLCPKCDFMNFAKNAVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCDCK 437

Query: 363 RPPDEFLENKMQDKKHSSRPNFDKM 437
           RPPD F+ENKM++++H SR   +K+
Sbjct: 438 RPPDTFMENKMEERQHGSRTRSEKI 462


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