BLASTX nr result

ID: Glycyrrhiza23_contig00028972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028972
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809...   178   6e-43
ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781...   176   2e-42
ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago trunc...   163   3e-38
ref|XP_002519894.1| transporter, putative [Ricinus communis] gi|...   122   7e-26
ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242...   119   6e-25

>ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
          Length = 508

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/100 (85%), Positives = 91/100 (91%)
 Frame = +2

Query: 2   FKQEVIPGASPSSLQGHSANVPVELTKGSPRLSTNLVNGAPPPDILERCEFLEPLSDSTV 181
           FKQEVIPGASPS LQGHSANVPVELTKG PR++ NLV+GAPPPDILERCEFLEPLS+ST+
Sbjct: 409 FKQEVIPGASPSHLQGHSANVPVELTKGGPRINGNLVDGAPPPDILERCEFLEPLSNSTL 468

Query: 182 SDYHWLLASIKEPSHGLIHKMRQYIASVVTFSGWFNSKLT 301
           SDYHWLL SI+EP HGLIHKM Q I SVV FSGWFNSKLT
Sbjct: 469 SDYHWLLTSIQEPGHGLIHKMYQNIISVVKFSGWFNSKLT 508


>ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
          Length = 552

 Score =  176 bits (447), Expect = 2e-42
 Identities = 84/100 (84%), Positives = 90/100 (90%)
 Frame = +2

Query: 2   FKQEVIPGASPSSLQGHSANVPVELTKGSPRLSTNLVNGAPPPDILERCEFLEPLSDSTV 181
           FKQEVIPGASPS LQGHSANVPVELTKG PRL+ NLV+GAPPPDILE+CEFLEPLS+ST+
Sbjct: 453 FKQEVIPGASPSHLQGHSANVPVELTKGGPRLNGNLVDGAPPPDILEKCEFLEPLSNSTL 512

Query: 182 SDYHWLLASIKEPSHGLIHKMRQYIASVVTFSGWFNSKLT 301
           SDYHWLL SI+EP HGLIHKM Q I SV  FSGWFNSKLT
Sbjct: 513 SDYHWLLTSIQEPGHGLIHKMYQNIISVAKFSGWFNSKLT 552


>ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
           gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F
           [Medicago truncatula]
          Length = 786

 Score =  163 bits (412), Expect = 3e-38
 Identities = 78/103 (75%), Positives = 89/103 (86%)
 Frame = +2

Query: 2   FKQEVIPGASPSSLQGHSANVPVELTKGSPRLSTNLVNGAPPPDILERCEFLEPLSDSTV 181
           FKQEVIPGASP  LQGHS NV +ELTKG PRL TNL++GAPPPDILERCEFLEPLS+S V
Sbjct: 453 FKQEVIPGASPPLLQGHSTNVALELTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNSAV 512

Query: 182 SDYHWLLASIKEPSHGLIHKMRQYIASVVTFSGWFNSKLT*IQ 310
           SDYHWLLASI+EP +GLIHKMRQYI+S+VT+SG     LT ++
Sbjct: 513 SDYHWLLASIQEPGNGLIHKMRQYISSLVTYSGRLTDVLTFVE 555


>ref|XP_002519894.1| transporter, putative [Ricinus communis]
           gi|223540940|gb|EEF42498.1| transporter, putative
           [Ricinus communis]
          Length = 507

 Score =  122 bits (305), Expect = 7e-26
 Identities = 56/93 (60%), Positives = 71/93 (76%)
 Frame = +2

Query: 2   FKQEVIPGASPSSLQGHSANVPVELTKGSPRLSTNLVNGAPPPDILERCEFLEPLSDSTV 181
           FKQEVIPGASPS+L+     VP ELT+G PRL TNL+ G PPP+IL RCEFLEPLSD+ +
Sbjct: 407 FKQEVIPGASPSALESTPVEVPEELTRGKPRLDTNLIAGVPPPEILSRCEFLEPLSDAQL 466

Query: 182 SDYHWLLASIKEPSHGLIHKMRQYIASVVTFSG 280
            DY WL+AS+++P   LIH++  YI+S+V   G
Sbjct: 467 LDYKWLIASMQQPGPNLIHRIHPYISSLVRSVG 499


>ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
           gi|296085502|emb|CBI29234.3| unnamed protein product
           [Vitis vinifera]
          Length = 553

 Score =  119 bits (297), Expect = 6e-25
 Identities = 55/91 (60%), Positives = 70/91 (76%)
 Frame = +2

Query: 2   FKQEVIPGASPSSLQGHSANVPVELTKGSPRLSTNLVNGAPPPDILERCEFLEPLSDSTV 181
           F +EVIPGASPS+++  S   P ELTKG P+L TNL+ G PPP+IL  CEFLEPLSD+T+
Sbjct: 455 FTEEVIPGASPSAIECASVEAPRELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATL 514

Query: 182 SDYHWLLASIKEPSHGLIHKMRQYIASVVTF 274
           SDY  L+A I++PSHGLIH + +YI S+  F
Sbjct: 515 SDYRGLIAGIQKPSHGLIHGLHRYILSLKEF 545


Top