BLASTX nr result

ID: Glycyrrhiza23_contig00028961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028961
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598445.1| Cc-nbs resistance protein [Medicago truncatu...    79   4e-13
emb|CAN83232.1| hypothetical protein VITISV_021876 [Vitis vinifera]    70   2e-10
emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]    69   3e-10
ref|XP_002270726.2| PREDICTED: probable disease resistance prote...    69   4e-10
emb|CBI22400.3| unnamed protein product [Vitis vinifera]               69   4e-10

>ref|XP_003598445.1| Cc-nbs resistance protein [Medicago truncatula]
            gi|355487493|gb|AES68696.1| Cc-nbs resistance protein
            [Medicago truncatula]
          Length = 1280

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248  NPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTA 69
            +P G  +FQ LS +K T+CESLNHV P SVA+DL  LQVL I  C VE I+A+D+     
Sbjct: 1125 DPQGKIKFQNLSMVKATKCESLNHVFPFSVAKDLLQLQVLEISDCGVEEIIAKDQGEVEE 1184

Query: 68   PI-LVFPELTSLSFRRLEKLRSF 3
             + LVF  L +L F  L++LR F
Sbjct: 1185 DLGLVFSRLVTLKFLNLQELRCF 1207


>emb|CAN83232.1| hypothetical protein VITISV_021876 [Vitis vinifera]
          Length = 1694

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = -2

Query: 248  NPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTA 69
            +P+G   FQ L  + + +C+SL ++ P S+ +DL  L+ L +  C +E IVA+D  + TA
Sbjct: 1193 DPHGILNFQNLKSIFIDKCQSLKNLFPASLVKDLVQLEKLKLRSCGIEEIVAKDNEAETA 1252

Query: 68   PILVFPELTSLSFRRLEKLRSF 3
               VFP++TSL    L +LRSF
Sbjct: 1253 AKFVFPKVTSLKLFHLHQLRSF 1274


>emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]
          Length = 1517

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/82 (41%), Positives = 49/82 (59%)
 Frame = -2

Query: 248  NPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTA 69
            +P+G   FQ L  + + EC+SL ++ P S+  DL  LQ L++  C +E IVA+D    T 
Sbjct: 1047 DPHGILNFQNLQSITIDECQSLKNLFPASLVRDLVQLQELHVLCCGIEEIVAKDNGVDTQ 1106

Query: 68   PILVFPELTSLSFRRLEKLRSF 3
               VFP++TSL    L +LRSF
Sbjct: 1107 ATFVFPKVTSLELSYLHQLRSF 1128


>ref|XP_002270726.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1347

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = -2

Query: 248  NPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTA 69
            +P+G   FQ L  + + +C+SL ++ P S+ +DL  L+ L +  C +E IVA+D  + TA
Sbjct: 1191 DPHGILNFQNLKSIFIDKCQSLKNLFPASLVKDLVQLEKLELRSCGIEEIVAKDNEAETA 1250

Query: 68   PILVFPELTSLSFRRLEKLRSF 3
               VFP++TSL    L +LRSF
Sbjct: 1251 AKFVFPKVTSLILVNLHQLRSF 1272


>emb|CBI22400.3| unnamed protein product [Vitis vinifera]
          Length = 759

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = -2

Query: 248 NPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTA 69
           +P+G   FQ L  + + +C+SL ++ P S+ +DL  L+ L +  C +E IVA+D  + TA
Sbjct: 330 DPHGILNFQNLKSIFIDKCQSLKNLFPASLVKDLVQLEKLELRSCGIEEIVAKDNEAETA 389

Query: 68  PILVFPELTSLSFRRLEKLRSF 3
              VFP++TSL    L +LRSF
Sbjct: 390 AKFVFPKVTSLILVNLHQLRSF 411


Top