BLASTX nr result

ID: Glycyrrhiza23_contig00028942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028942
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540841.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   175   4e-42
ref|XP_003527492.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   169   2e-40
ref|XP_003541945.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   160   1e-37
ref|XP_003596996.1| Glutamate receptor 3.4 [Medicago truncatula]...   160   1e-37
ref|XP_003539503.1| PREDICTED: glutamate receptor 3.4-like [Glyc...   159   3e-37

>ref|XP_003540841.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 924

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/127 (67%), Positives = 104/127 (81%)
 Frame = -2

Query: 497  LAVDLSTAILQLSENGGLQKIHDKWLNVKGCATNDIDSSKLSLTSFWGLFLICGIVCVLA 318
            LAVDLSTAILQLSE+G LQ+IHDKWLN K CAT D +S+KL+LTSFWGLFLICGI CV+A
Sbjct: 796  LAVDLSTAILQLSESGDLQRIHDKWLNKKECATVDANSNKLALTSFWGLFLICGIACVIA 855

Query: 317  LIVFFARVFCQYNKFSLEPKQVDEEILXXXXXXXXXXXSFKDLIVFVDKREAEIKEILRQ 138
            LI+FFAR+FCQYNKFS EP++ D+E+            S K L+VFVD+REA+IKEILR+
Sbjct: 856  LIIFFARIFCQYNKFSPEPEKTDKEMQPVRSRRPSRTRSLKKLMVFVDRREADIKEILRE 915

Query: 137  KKRRRYS 117
             K+RR+S
Sbjct: 916  NKKRRHS 922


>ref|XP_003527492.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 929

 Score =  169 bits (429), Expect = 2e-40
 Identities = 85/128 (66%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = -2

Query: 497  LAVDLSTAILQLSENGGLQKIHDKWLNVKGCATNDIDSSKLSLTSFWGLFLICGIVCVLA 318
            LA+DLSTAILQLSE+G LQKIHDKWLN K C+T D DS+KL+LTSFWGLFLICGI CV+A
Sbjct: 800  LAIDLSTAILQLSESGDLQKIHDKWLNKKECSTVDTDSNKLALTSFWGLFLICGIACVIA 859

Query: 317  LIVFFARVFCQYNKFSLEPKQVDE-EILXXXXXXXXXXXSFKDLIVFVDKREAEIKEILR 141
            L +FFAR+FCQYNKFS EP ++D+ E+            S K L+VFVD+REA+IKEILR
Sbjct: 860  LTIFFARIFCQYNKFSPEPDKIDDKEMQPVRPRRPSRTRSIKKLMVFVDRREADIKEILR 919

Query: 140  QKKRRRYS 117
            + K+RR S
Sbjct: 920  ENKKRRLS 927


>ref|XP_003541945.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 947

 Score =  160 bits (405), Expect = 1e-37
 Identities = 91/145 (62%), Positives = 104/145 (71%), Gaps = 7/145 (4%)
 Frame = -2

Query: 497  LAVDLSTAILQLSENGGLQKIHDKWLNVKGCAT--NDIDSSKLSLTSFWGLFLICGIVCV 324
            LAV++STAILQLSENG LQKIHDKWL    C+   ND D +KLSL+SFWGLFLICGI C+
Sbjct: 803  LAVEMSTAILQLSENGDLQKIHDKWLLKHDCSAPDNDADLNKLSLSSFWGLFLICGIACL 862

Query: 323  LALIVFFARVFCQYNKFSLEPKQVDEEIL----XXXXXXXXXXXSFKDLIVFVDKREAEI 156
            LAL+ F  RV CQY KFS EP+Q DEE                 SF+DLI FVDK+E EI
Sbjct: 863  LALVAFSIRVLCQYTKFSPEPEQDDEETSPNRPTKGKRLFRSTTSFRDLIYFVDKKEKEI 922

Query: 155  KEILRQK-KRRRYSQSLDLQSNSPT 84
            KEILRQK K+RR + SLD QS+SPT
Sbjct: 923  KEILRQKSKKRRRNLSLDGQSSSPT 947


>ref|XP_003596996.1| Glutamate receptor 3.4 [Medicago truncatula]
            gi|355486044|gb|AES67247.1| Glutamate receptor 3.4
            [Medicago truncatula]
          Length = 931

 Score =  160 bits (405), Expect = 1e-37
 Identities = 90/143 (62%), Positives = 102/143 (71%), Gaps = 5/143 (3%)
 Frame = -2

Query: 497  LAVDLSTAILQLSENGGLQKIHDKWLNVKGCAT--NDIDSSKLSLTSFWGLFLICGIVCV 324
            LA+D+STAILQLSENG LQKIHDKWL+ + C    +D DS++LSL SFWGLFLICGI C+
Sbjct: 789  LAIDMSTAILQLSENGDLQKIHDKWLSRQSCGAKVDDTDSNELSLKSFWGLFLICGIACL 848

Query: 323  LALIVFFARVFCQYNKF--SLEPKQVDEEILXXXXXXXXXXXSFKDLIVFVDKREAEIKE 150
            +ALI FF RVFCQY KF    E +   E              SFKDLIVFVDKRE EIK+
Sbjct: 849  IALITFFVRVFCQYMKFIPESEMESDQENPSPRPRKTFRSSRSFKDLIVFVDKREREIKD 908

Query: 149  ILRQK-KRRRYSQSLDLQSNSPT 84
            ILRQK K+RR  QSLD Q NSPT
Sbjct: 909  ILRQKSKKRRRDQSLDDQFNSPT 931


>ref|XP_003539503.1| PREDICTED: glutamate receptor 3.4-like [Glycine max]
          Length = 947

 Score =  159 bits (401), Expect = 3e-37
 Identities = 91/145 (62%), Positives = 104/145 (71%), Gaps = 7/145 (4%)
 Frame = -2

Query: 497  LAVDLSTAILQLSENGGLQKIHDKWLNVKGCAT--NDIDSSKLSLTSFWGLFLICGIVCV 324
            LAVD+STAILQLSENG LQKIHDKWL  + C+   +D D +KLSL SFWGLFLI GI C+
Sbjct: 803  LAVDMSTAILQLSENGDLQKIHDKWLLKRDCSAPDSDADLNKLSLGSFWGLFLISGIACL 862

Query: 323  LALIVFFARVFCQYNKFSLEPKQVDEEIL----XXXXXXXXXXXSFKDLIVFVDKREAEI 156
            LAL+ FF RV CQY KFS EP+Q DEEI                SF+DLI FVDK+E EI
Sbjct: 863  LALVTFFIRVLCQYTKFSPEPEQDDEEISPNRPTKSKGLFRSTTSFRDLIYFVDKKEKEI 922

Query: 155  KEILRQK-KRRRYSQSLDLQSNSPT 84
            K+ILRQK K+RR S S D QS+SPT
Sbjct: 923  KDILRQKSKKRRRSLSSDGQSSSPT 947


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