BLASTX nr result

ID: Glycyrrhiza23_contig00028940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028940
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520836.1| PREDICTED: trihelix transcription factor GTL...    65   8e-09
ref|XP_003556463.1| PREDICTED: trihelix transcription factor GTL...    63   3e-08
ref|NP_001236643.1| trihelix transcription factor [Glycine max] ...    55   6e-06

>ref|XP_003520836.1| PREDICTED: trihelix transcription factor GTL2-like [Glycine max]
          Length = 586

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 53/151 (35%), Positives = 65/151 (43%)
 Frame = +2

Query: 122 MLDGAEQHQFHQFVVAPPIRTTXXXXXXXXXXXXXXTPNDTTSFLLPFDPYNNYXXXXXX 301
           M DGA   QFHQF+   P RTT              +     +FL PFDPYN        
Sbjct: 1   MFDGAPD-QFHQFIA--PTRTTLPLHMSFPLHHHASSTPPPNTFL-PFDPYN-------P 49

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDQDKELPNRTFYSSEIEIRDDDHQRQ 481
                                             +QDK  P     ++++EI+ D  QRQ
Sbjct: 50  SSHHHHLPSLQTNHLLHPLHPPTTIISPTPTHKHEQDKVAPINN--NNDVEIQRD--QRQ 105

Query: 482 LPACASIDDSWSNDEVLAMLRIRSSMENWFP 574
           LP    + DSW+NDEVLA+ RIRSSMENWFP
Sbjct: 106 LPD--QLTDSWTNDEVLALFRIRSSMENWFP 134


>ref|XP_003556463.1| PREDICTED: trihelix transcription factor GTL2-like [Glycine max]
          Length = 590

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 53/151 (35%), Positives = 64/151 (42%)
 Frame = +2

Query: 122 MLDGAEQHQFHQFVVAPPIRTTXXXXXXXXXXXXXXTPNDTTSFLLPFDPYNNYXXXXXX 301
           M DG    QFHQF+     RT+              TPN TT+F   FDPYN+       
Sbjct: 1   MFDGVPD-QFHQFITP---RTSLPLHLPFPLHTSGGTPN-TTTFPSNFDPYNH------- 48

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDQDKELPNRTFYSSEIEIRDDDHQRQ 481
                                            KD+DKE    T     +EI+ D  Q Q
Sbjct: 49  ----------------PHQLPLQPNNLLHPLHHKDEDKE--ENTTVPMNLEIQRDQRQ-Q 89

Query: 482 LPACASIDDSWSNDEVLAMLRIRSSMENWFP 574
           LP    + D W+NDEVLA+LRIRSSME+WFP
Sbjct: 90  LP---ELIDPWNNDEVLALLRIRSSMESWFP 117


>ref|NP_001236643.1| trihelix transcription factor [Glycine max]
           gi|146674837|gb|ABQ42350.1| trihelix transcription
           factor [Glycine max]
          Length = 581

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 50/151 (33%), Positives = 59/151 (39%)
 Frame = +2

Query: 122 MLDGAEQHQFHQFVVAPPIRTTXXXXXXXXXXXXXXTPNDTTSFLLPFDPYNNYXXXXXX 301
           M DG    QFHQF+       T              TPN  T+F   FDPYNN       
Sbjct: 1   MFDGVPD-QFHQFITP----RTSQPLHLPFPLHASGTPN--TTFPSNFDPYNN------- 46

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDQDKELPNRTFYSSEIEIRDDDHQRQ 481
                                            KD++KE  N T      EI+ D  Q Q
Sbjct: 47  ---------------PSHQLPLQPNNLLHPLHHKDEEKE-ENTTTVPMNFEIQRDQRQ-Q 89

Query: 482 LPACASIDDSWSNDEVLAMLRIRSSMENWFP 574
           LP    + D W+ DEVL +LRIRSSME+WFP
Sbjct: 90  LP---ELIDPWTTDEVLTLLRIRSSMESWFP 117


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