BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028925
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   145   3e-33
ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   117   1e-24
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...   116   2e-24
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   116   2e-24

>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/99 (74%), Positives = 81/99 (81%)
 Frame = -2

Query: 353  IYSVIVTGXXXXXXXXXXXSKFHTLRDRCRILLQVHDELVLEVHPSVIKEAAILLQTSME 174
            IYS IVTG           +KFH L+DRCRILLQVHDEL+LEV PSVIKEAA+LLQTSME
Sbjct: 2049 IYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELMLEVDPSVIKEAALLLQTSME 2108

Query: 173  NAVSLLVPLHVKLKVGRTWGSLEPFTPDKFKDDTLITES 57
            NAVSLLVPLHVKLKVGRTWGSLEP+T DKF + TL+ ES
Sbjct: 2109 NAVSLLVPLHVKLKVGRTWGSLEPYTSDKFNNATLVAES 2147


>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/99 (63%), Positives = 75/99 (75%)
 Frame = -2

Query: 353 IYSVIVTGXXXXXXXXXXXSKFHTLRDRCRILLQVHDELVLEVHPSVIKEAAILLQTSME 174
           I+S+IV G           +KFH L+ +CRILLQVHDELVLEV PS+I EAA+LLQ SME
Sbjct: 548 IHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDELVLEVDPSLINEAAVLLQMSME 607

Query: 173 NAVSLLVPLHVKLKVGRTWGSLEPFTPDKFKDDTLITES 57
           +A SLLVPLHVKLKVGRTWGSLEPF  D+  ++ L+ ES
Sbjct: 608 DAASLLVPLHVKLKVGRTWGSLEPFLADQHVNEVLMPES 646


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/88 (68%), Positives = 66/88 (75%)
 Frame = -2

Query: 353  IYSVIVTGXXXXXXXXXXXSKFHTLRDRCRILLQVHDELVLEVHPSVIKEAAILLQTSME 174
            IYS I              ++FH L+ RCRILLQVHDELVLEV PS +K AA+LLQTSME
Sbjct: 2060 IYSAIAEDVDTTASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKVAAMLLQTSME 2119

Query: 173  NAVSLLVPLHVKLKVGRTWGSLEPFTPD 90
            NAVSLLVPLHVKLKVG+TWGSLEPF  D
Sbjct: 2120 NAVSLLVPLHVKLKVGKTWGSLEPFQAD 2147


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score =  116 bits (291), Expect = 2e-24
 Identities = 72/143 (50%), Positives = 77/143 (53%), Gaps = 44/143 (30%)
 Frame = -2

Query: 353  IYSVIVTGXXXXXXXXXXXSKFHTLRDRCRILLQVHDELVLEVHPSVIKEAAILLQTSME 174
            IYS I  G           +KF  LRDRCRILLQVHDELVLEV PSV+KEAA+LLQTSME
Sbjct: 2127 IYSEIFPGVDKLDSSSSVTAKFEMLRDRCRILLQVHDELVLEVDPSVVKEAALLLQTSME 2186

Query: 173  NAVSLL--------------------------------------------VPLHVKLKVG 126
            NAVSLL                                            VPL+VKLKVG
Sbjct: 2187 NAVSLLGLYSLNKLFFWPFLFGCRHKLVKVIEDLTVWSNHIFTVYAYASAVPLNVKLKVG 2246

Query: 125  RTWGSLEPFTPDKFKDDTLITES 57
            RTWGSLEPF PDKF  DT I +S
Sbjct: 2247 RTWGSLEPFAPDKFTGDTPIADS 2269


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/88 (68%), Positives = 66/88 (75%)
 Frame = -2

Query: 353  IYSVIVTGXXXXXXXXXXXSKFHTLRDRCRILLQVHDELVLEVHPSVIKEAAILLQTSME 174
            IYS I              ++FH L+ RCRILLQVHDELVLEV PS +K AA+LLQTSME
Sbjct: 2067 IYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAAMLLQTSME 2126

Query: 173  NAVSLLVPLHVKLKVGRTWGSLEPFTPD 90
            NAVSLLVPLHVKLKVG+TWGSLEPF  D
Sbjct: 2127 NAVSLLVPLHVKLKVGKTWGSLEPFQTD 2154