BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028920
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula] gi...    97   1e-18
ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula] gi...    93   3e-17
emb|CAA74890.1| topoisomerase I [Pisum sativum]                        90   2e-16
ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula] gi...    79   5e-13
ref|XP_002300344.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492848|gb|AES74051.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 921

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 68/146 (46%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
 Frame = -2

Query: 428 QSSSLQKCKIVPSAKPSSMGSSVGISNASTSHLKTYSARSPIVSSKLPSLGDKKERLSGQ 249
           Q+SS Q  K+VPSAK S++ SSVG + ASTS+LKT                         
Sbjct: 52  QTSSSQNGKVVPSAKASAVESSVGNTKASTSNLKT----------------------QRN 89

Query: 248 KISVDVKEEKSS---VKEDNCGDSEDEEDDKPLGA-RFKMNNDNSKKVTPIVPKKXXXXX 81
           K  ++V EE +S   +KED C DSE EED  PL A + KMNN N KK TP V KK     
Sbjct: 90  KDLINVNEENNSTKHLKEDRCEDSE-EEDSIPLSAIKMKMNNGNVKKATPDVLKKSYEDS 148

Query: 80  XXXDIPLSARLLRNTNLGRSSSNYDD 3
              DIPLSAR  +NTNLG+ S N+DD
Sbjct: 149 DDDDIPLSARFPKNTNLGKYSCNFDD 174


>ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492841|gb|AES74044.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 1009

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 68/148 (45%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 QSSSLQKCKIVPSAKPSSMGSSVGISNASTSHLKTYSARSPIVSSKLPSLGDKKERLSGQ 249
           Q+SS Q  K+VPSAK S++ SSVG + ASTS+LKT                         
Sbjct: 52  QTSSSQNGKVVPSAKASAVESSVGNTKASTSNLKT----------------------QRN 89

Query: 248 KISVDVKEEKSS---VKEDNCGDSEDEEDDKPLGA-RFKMNNDNSKKVTPIVPKK--XXX 87
           K  ++V EE +S   +KED C DSE EED  PL + + KMNN N KK TP V KK     
Sbjct: 90  KDLINVNEENNSTKHLKEDRCEDSE-EEDSIPLSSIKMKMNNGNVKKATPDVLKKSYEDS 148

Query: 86  XXXXXDIPLSARLLRNTNLGRSSSNYDD 3
                DIPLSARL +NTNLG+S  N+DD
Sbjct: 149 DDDDDDIPLSARLPKNTNLGKSRCNFDD 176


>emb|CAA74890.1| topoisomerase I [Pisum sativum]
          Length = 892

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/137 (40%), Positives = 82/137 (59%), Gaps = 10/137 (7%)
 Frame = -2

Query: 383 PSSMGSSVGISNASTSHLKTYSARSPIVSSKLPSLGDKKERLSGQKISVDVKEEKSSVKE 204
           P S G ++  SN++ +   T S +SP+ +S  PSLGDK + L GQ ++VDVK++ + +K 
Sbjct: 60  PLSNGQNLKPSNSAVN---TSSNKSPVANSNSPSLGDKPKPLLGQNVTVDVKKQTTPIKH 116

Query: 203 DN---CGDSEDEEDDKPLGARFKM-NNDNSKKVTPIVPKK--XXXXXXXXDIP----LSA 54
                C   ED++DDKPL +R+K+ +N  SK V P+V  K           +P    LSA
Sbjct: 117 PTKGYCEGLEDDDDDKPLSSRWKIKSNHGSKVVAPVVNNKSSQDSDSDDDVVPLSANLSA 176

Query: 53  RLLRNTNLGRSSSNYDD 3
           +L+RN+N G SS NYDD
Sbjct: 177 KLIRNSNSGTSSMNYDD 193


>ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492833|gb|AES74036.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 789

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 64/143 (44%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
 Frame = -2

Query: 428 QSSSLQKCKIVPSAKPSSMGSSVGISNASTSHLKTYSARSPIVSSKLPSLGDKKERLSGQ 249
           QSSS Q  K++ SA  S++ SSVGISNASTS+LKTY+ RSP                   
Sbjct: 53  QSSSSQNGKVIRSAMASAVESSVGISNASTSNLKTYT-RSP------------------- 92

Query: 248 KISVDVKEEKSSVKEDNCGDSEDEEDDKPLGA-RFKMNNDNSKKVTPIVPKKXXXXXXXX 72
                       +KED   DS DEED  PL   R KMNN N KK TP V KK        
Sbjct: 93  --------STKHLKEDRREDSADEEDSMPLSVIRMKMNNANVKKATPNVLKK-SYEDFDD 143

Query: 71  DIPLSARLLRNTNLGRSSSNYDD 3
           DIPLSARL + T       NYDD
Sbjct: 144 DIPLSARLSQIT-------NYDD 159


>ref|XP_002300344.1| predicted protein [Populus trichocarpa] gi|222847602|gb|EEE85149.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = -2

Query: 428 QSSSLQKCKI-VPSAKPSSMGSSVGISNASTSHLKTYSARSPIVSSK-LPSLGDKKERLS 255
           QS +LQK K  +PS+  S M SS G   AS S  K    +SP+  ++ L S  D+ ++ S
Sbjct: 57  QSLNLQKGKSPIPSSNASPMKSSTGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQAS 116

Query: 254 GQKISVDVKEEKSSVKEDNCGDSEDEEDDKPLGARFKMNNDNSKKVTPIVPKKXXXXXXX 75
            Q +S  VKEE  S+ +D     ED EDDKPL +R K + +N  K               
Sbjct: 117 KQVVSNAVKEETKSIVDD-----EDSEDDKPLSSRIKGSTNNVNKGVTAPAHVKDEPSDD 171

Query: 74  XDIPLSARLLRNTNLGRSSS 15
            ++PLS+R    +N G SSS
Sbjct: 172 DEVPLSSRFAMKSNAGTSSS 191