BLASTX nr result

ID: Glycyrrhiza23_contig00028903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028903
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ...   109   4e-22
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...   108   5e-22
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ...   108   5e-22
ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit ...   104   1e-20
gb|ACJ84717.1| unknown [Medicago truncatula]                          102   6e-20

>ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score =  109 bits (272), Expect = 4e-22
 Identities = 64/101 (63%), Positives = 71/101 (70%)
 Frame = -3

Query: 441 MDLMEAVVAQIQGLSSTQADIACLHTVLKQADDSLRFESTCXXXXXXXXXXXXXXLGFLY 262
           MD +EA+VAQIQGLSST  D+  LH+VLKQADDSLR EST               LGFLY
Sbjct: 1   MDPLEALVAQIQGLSSTPGDLTRLHSVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 261 ILEASTAAAPVSKQQAETIVPIIARFISAYSVEQIRLAPDK 139
           ILEAS    PV+K QAET+VPI+ RFI A S EQIRLAPDK
Sbjct: 61  ILEAS-MTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDK 100


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score =  108 bits (271), Expect = 5e-22
 Identities = 63/101 (62%), Positives = 70/101 (69%)
 Frame = -3

Query: 441 MDLMEAVVAQIQGLSSTQADIACLHTVLKQADDSLRFESTCXXXXXXXXXXXXXXLGFLY 262
           MD +EA+VAQIQGLSS+  D+  LHTVLKQADDSLR EST               LGFLY
Sbjct: 1   MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 261 ILEASTAAAPVSKQQAETIVPIIARFISAYSVEQIRLAPDK 139
           ILEAS    PV+K QAE +VPI+ RFI A S EQIRLAPDK
Sbjct: 61  ILEAS-MTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDK 100


>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score =  108 bits (271), Expect = 5e-22
 Identities = 63/101 (62%), Positives = 70/101 (69%)
 Frame = -3

Query: 441 MDLMEAVVAQIQGLSSTQADIACLHTVLKQADDSLRFESTCXXXXXXXXXXXXXXLGFLY 262
           MD +EA+VAQIQGLSS+  D+  LHTVLKQADDSLR EST               LGFLY
Sbjct: 1   MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 261 ILEASTAAAPVSKQQAETIVPIIARFISAYSVEQIRLAPDK 139
           ILEAS    PV+K QAE +VPI+ RFI A S EQIRLAPDK
Sbjct: 61  ILEAS-MTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDK 100


>ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 425

 Score =  104 bits (259), Expect = 1e-20
 Identities = 61/97 (62%), Positives = 68/97 (70%)
 Frame = -3

Query: 429 EAVVAQIQGLSSTQADIACLHTVLKQADDSLRFESTCXXXXXXXXXXXXXXLGFLYILEA 250
           +A+VAQIQGLSST  D+  LH+VLKQADDSLR EST               LGFLYILEA
Sbjct: 7   QALVAQIQGLSSTPGDLTRLHSVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILEA 66

Query: 249 STAAAPVSKQQAETIVPIIARFISAYSVEQIRLAPDK 139
           S    PV+K QAET+VPI+ RFI A S EQIRLAPDK
Sbjct: 67  S-MTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDK 102


>gb|ACJ84717.1| unknown [Medicago truncatula]
          Length = 359

 Score =  102 bits (253), Expect = 6e-20
 Identities = 56/101 (55%), Positives = 74/101 (73%)
 Frame = -3

Query: 441 MDLMEAVVAQIQGLSSTQADIACLHTVLKQADDSLRFESTCXXXXXXXXXXXXXXLGFLY 262
           MD +E ++AQIQGLSS+ ADIA LHT+LK +D++LR +S+               LGFLY
Sbjct: 1   MDPLEPLIAQIQGLSSSSADIARLHTILKHSDETLRSDSSRLYPILQLIDPSIHSLGFLY 60

Query: 261 ILEASTAAAPVSKQQAETIVPIIARFISAYSVEQIRLAPDK 139
           +L+A +AA+  ++QQAE  VPIIARFI+A SVEQIRLAP+K
Sbjct: 61  LLDAFSAASVSNQQQAEEAVPIIARFINACSVEQIRLAPEK 101


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