BLASTX nr result

ID: Glycyrrhiza23_contig00028891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028891
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago ...    82   5e-14
ref|XP_003600524.1| hypothetical protein MTR_3g062210 [Medicago ...    76   3e-12
ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago ...    72   6e-11
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       71   1e-10
gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]       70   2e-10

>ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago truncatula]
           gi|355496952|gb|AES78155.1| hypothetical protein
           MTR_7g025220 [Medicago truncatula]
          Length = 455

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
 Frame = +2

Query: 2   LNSVLSMVLEHERQNGLEPIQDASQSLVNAADGKKHYGRGRGKWSNKQ----CSHCGKAG 169
           LN V  +V++ E  N   P+QD S  L+NA++ +K +GRG+  +SNK     C+ C +  
Sbjct: 83  LNYVYYLVVQEESNNSTLPVQDDSNVLINASESRKSFGRGKNSYSNKNSSRLCTFCNRTN 142

Query: 170 HTIDVCYEIHGYPIGYKRNFKPSVNLAADASDTKSEMGDKMA-SSSISQEEFKQLMDLLK 346
           HT++ CY+ HG P   K++   SVN +   S   +  G+ +   S ++QE+  QL+ LL+
Sbjct: 143 HTVEFCYQKHGNPSFNKQS--SSVNASLGESSKAAHGGNAVVPPSGLNQEQLSQLVSLLQ 200

Query: 347 KVNV 358
           + N+
Sbjct: 201 QSNL 204


>ref|XP_003600524.1| hypothetical protein MTR_3g062210 [Medicago truncatula]
           gi|355489572|gb|AES70775.1| hypothetical protein
           MTR_3g062210 [Medicago truncatula]
          Length = 405

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
 Frame = +2

Query: 2   LNSVLSMVLEHERQNGLEPIQDASQSLVNAADGKKHYGRGRGKWSN----KQCSHCGKAG 169
           LN V S+V++ E ++  E +   + +L N+AD KK  G+G+  +S+    K C+ CG+ G
Sbjct: 118 LNRVYSLVIQEESKDVFESVILMNPTLDNSADSKKFPGKGKSSFSSGYKSKLCTFCGRHG 177

Query: 170 HTIDVCYEIHGYPIGYKRNFKPSVNLAADASDT-----KSEMGDKMASSS---ISQEEFK 325
           HT+D CY+ HG+P  + +N   SVN      D        E   K+ SSS    +QE+F 
Sbjct: 178 HTVDTCYKKHGFPPNFGQN--SSVNNVESLLDNVHVAENVEEPSKVQSSSGPMFTQEQFD 235

Query: 326 QLMDLLKKVNVAQPSPVLKEEHSVNQIYADADGII 430
           +L+ L+         P  +++H  NQI + A  +I
Sbjct: 236 RLLALI--------PPHSEKKHLANQITSHASTVI 262


>ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago truncatula]
           gi|355485102|gb|AES66305.1| hypothetical protein
           MTR_2g065630 [Medicago truncatula]
          Length = 475

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
 Frame = +2

Query: 2   LNSVLSMVLEHERQN-GLEPIQDASQSLVNAADGKKHYGRGRGKWSN----KQCSHCGKA 166
           +N V S+V++ E  N  L    D   SLVNAA+ +K  GRGRG        + CS CGK+
Sbjct: 189 INKVYSLVVQEESNNKSLSSPIDEPLSLVNAAESRKPQGRGRGYSHGFRPPRHCSFCGKS 248

Query: 167 GHTIDVCYEIHGYPIGYKRNFKPSVNLAADASDTKSEMGDKMASSS 304
            HTI+ CY+ HG+P  +K+N   SVN ++   + +++ G     SS
Sbjct: 249 NHTIEFCYQKHGHPNFHKQN--ASVNASSSNDEVEAQSGSTSTPSS 292


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
 Frame = +2

Query: 2   LNSVLSMVLEHERQN---GLEPIQDASQSLVNAADGKKHYGRGRG-------KWSNKQCS 151
           +N V S+V++ E QN       I D S   VNA+D +K Y RG+G       K  ++ C+
Sbjct: 212 INKVYSLVVQEESQNIVFSTPSISDDSSISVNASDARKFYPRGKGTSSTSANKGKDRFCT 271

Query: 152 HCGKAGHTIDVCYEIHGYPIGYKRNFKPSVNLAADASDTKSEMG--DKMASS---SISQE 316
            C +  HTI+ CY  +G+P  + +    + N  ++ASDT + +G  D +A     S++QE
Sbjct: 272 FCNRYNHTIEFCYLKYGHP-NFNKGNSSANNAVSEASDTNNSIGTNDVVAPDSKFSLTQE 330

Query: 317 EFKQLMDLLKKVNV 358
           ++  L+ LL++ N+
Sbjct: 331 KYDHLVALLQQANL 344


>gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]
          Length = 604

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
 Frame = +2

Query: 2   LNSVLSMVLEHERQNGL----EPIQDASQSLVNAADGKKHYGRGR-------GKWSNKQC 148
           +N + S+V++ E  N +      I+D S  LVNA+D +K +GRG+        K ++K C
Sbjct: 145 INKIYSLVIQEESNNSVVTASSSIED-SNILVNASDARKPFGRGKLNSGSHPPKNNSKYC 203

Query: 149 SHCGKAGHTIDVCYEIHGYPIGYKRNFKPSVNLAADASDTKSEMGDKMASSSISQEEFKQ 328
           S C K  HT++ CY+ HG+P   K +   S N        +S+    ++   ++QE++  
Sbjct: 204 SFCHKTNHTLEFCYQKHGFPNANKGS--GSTNAVNSEGVPESQGSSAISQIGLTQEQYVH 261

Query: 329 LMDLLKKVNVAQPSP 373
           L+ LL++ ++  P+P
Sbjct: 262 LVSLLQQSSLIIPAP 276


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